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Protein
Submitted name:

Uncharacterized protein

Gene

SORBI_3004G141800

Organism
Sorghum bicolor (Sorghum) (Sorghum vulgare)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:SORBI_3004G141800Imported
OrganismiSorghum bicolor (Sorghum) (Sorghum vulgare)Imported
Taxonomic identifieri4558 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaeAndropogonodaeAndropogoneaeSorghinaeSorghum
Proteomesi
  • UP000000768 Componenti: Chromosome 4

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei647 – 666HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

ExpressionAtlasiA0A1Z5RMD0 baseline

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili219 – 239Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

A0A1Z5RMD0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSNKTLQARI LQSKSDNKLF LDIEKGVNRR PLYESHPLSS FSWTRTDSID
60 70 80 90 100
MGGWSKKCKE ALSNFELLKE GKSKDDIVYE KAVQILHGTK DEVHDIVQTA
110 120 130 140 150
LKSSDLKGLH AQCLTDIWIG RERFAFVDLS AGPFAWGPSV GGDGVRTELS
160 170 180 190 200
LPNVAKTVGA VAEVTEEEAE EKLQDTIRER FSSFGEDYHA VDILLAEIDV
210 220 230 240 250
YELFAFKHCV GRRIQLALCK ELDERMHDLK KELEGYNTGD SDEINKKKAL
260 270 280 290 300
DALKRMENWN LFRDTKVEHH SYTVAHDSFL AQLGSMLWGS MRHVIAPSAS
310 320 330 340 350
HRANHYYEKL SFQLYFVTQE KVRSIKQLPV NVKSITESLS SVLLHHQKSM
360 370 380 390 400
FSQNMLSLSE DPSLMMAFSM ARRAAAVPLL LVNGTYKSTV STYLDSAILQ
410 420 430 440 450
HQLQRLNEHN SLKGGHSNHR STLEVPIFWF IHNEPLLLDK HYQAKALSNM
460 470 480 490 500
VVVVQSDDDS WESHLQCNGR PILWDLRKPV KAAIAATAEY VSGLLPPHLV
510 520 530 540 550
YSHAHETAIE DWTWSVGCNP SAVTSQGSQL SEFQQDVIAR NYIITSVEES
560 570 580 590 600
IQVVNSAIQQ LVKERTTEKG FKIFKAHESK MVEKYNAVIS LWRRVSAMSK
610 620 630 640 650
GLRYGDAVKL MSMLEDASNG FSSAVNSTIS SLHPVQCTRE RKLDVQLDLT
660 670
TLPAFVAVFL LLWFLLRPRR PKPKIN
Length:676
Mass (Da):76,484
Last modified:September 27, 2017 - v1
Checksum:i34F68C7A02B4A2F7
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A194YPM2A0A194YPM2_SORBI
Uncharacterized protein
SORBI_3004G141800
952Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000763 Genomic DNA Translation: OQU84911.1
CM000763 Genomic DNA Translation: OQU84912.1

Genome annotation databases

EnsemblPlantsiOQU84911; OQU84911; SORBI_3004G141800
OQU84912; OQU84912; SORBI_3004G141800
GrameneiOQU84911; OQU84911; SORBI_3004G141800
OQU84912; OQU84912; SORBI_3004G141800

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000763 Genomic DNA Translation: OQU84911.1
CM000763 Genomic DNA Translation: OQU84912.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOQU84911; OQU84911; SORBI_3004G141800
OQU84912; OQU84912; SORBI_3004G141800
GrameneiOQU84911; OQU84911; SORBI_3004G141800
OQU84912; OQU84912; SORBI_3004G141800

Gene expression databases

ExpressionAtlasiA0A1Z5RMD0 baseline

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiA0A1Z5RMD0_SORBI
AccessioniPrimary (citable) accession number: A0A1Z5RMD0
Entry historyiIntegrated into UniProtKB/TrEMBL: September 27, 2017
Last sequence update: September 27, 2017
Last modified: May 23, 2018
This is version 6 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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