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Entry version 17 (29 Sep 2021)
Sequence version 1 (30 Aug 2017)
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Protein

DNA-directed DNA polymerase

Gene
N/A
Organism
Ranid herpesvirus 3
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionDNA-bindingARBA annotation, DNA-directed DNA polymeraseARBA annotation, Nucleotidyltransferase, Transferase
Biological processDNA replication, Viral DNA replicationARBA annotation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
DNA-directed DNA polymeraseARBA annotation (EC:2.7.7.7ARBA annotation)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiRanid herpesvirus 3Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri1987509 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiVirusesDuplodnaviriaHeunggongviraePeploviricotaHerviviricetesHerpesviralesAlloherpesviridaeBatrachovirus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000203507 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Genome

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini611 – 912DNA_pol_BInterPro annotationAdd BLAST302

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the DNA polymerase type-B family.ARBA annotation

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR006172, DNA-dir_DNA_pol_B
IPR006134, DNA-dir_DNA_pol_B_multi_dom
IPR043502, DNA/RNA_pol_sf
IPR012337, RNaseH-like_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00136, DNA_pol_B, 1 hit

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR00106, DNAPOLB

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00486, POLBc, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF53098, SSF53098, 1 hit
SSF56672, SSF56672, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A1X9T5B1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEGSYWSFVK AALPQQRSIG ADELLIMVSS VRLLKGEQFL LRVSDTLHPQ
60 70 80 90 100
ACKLCYVRNL NFPVFVDVSS SYEDVWARTN AVNRIVNKNG GDYVAELSMF
110 120 130 140 150
NSDTKEMKPY AMYIFKNYDS AQIAANKLTF EQGLDVGRFQ QRSDYDGSVQ
160 170 180 190 200
ALMNGIRIGC YGINRQLFET QNVLFISPAD LIYDVHADEQ FIMRSTGLNA
210 220 230 240 250
SAKLPFVTAA FDIETMVDKS KGATPTITSD LFNDVGILKS EYVRLNNVIV
260 270 280 290 300
GKNERGDPVP KPFVTRVSLP KLELRPLDHG DINSIALVVK DAKPKSRYVF
310 320 330 340 350
YNGGLTNCEP EAFSGRFIVP QTYTFIKCEN EYEMLRAFLN RLMTVDVLYV
360 370 380 390 400
YNAEFDVQVV QNRIKHWDKQ NGDKVLSNLW RDFLSKGSSV EPKVELFNNV
410 420 430 440 450
LIGHYVKLLK ATHEAIDEKD KDAFESACKL FRKNQTFAQS FRVLGFGTHI
460 470 480 490 500
IDIFRLIYTE KIKKSCKGLS LNAVASSIIR QHKPNKNPLK YQKVEDVSYS
510 520 530 540 550
VMDDYFVGSN PNKLFHYLIY NLADAELLMR MEKVLQPVEK MIIKTRATMN
560 570 580 590 600
IDSLHFGRVK TYFDNFIQST RAVEVPKLKA RIDLNRICAV NPVNVNCTLP
610 620 630 640 650
SRYKTWTRAT DDETDKLKGG YVIAPAMGLS FAGQTQSVEI TMDFTSLYPS
660 670 680 690 700
NMIDVNVSTD AMIEYVDFKN FQNWVVYDCS DLLGDAECYT LLIQPNGLKF
710 720 730 740 750
QTDTNTSVGN YLKHRKHYKK LMAQAVSSED RAYYNTMQSE MKICCNSAYG
760 770 780 790 800
VAPLISQKII TALGREKLET VSKAAQIRKK FVKYGDTDSI MYVEYKYEPL
810 820 830 840 850
EQPRGVSSRE LCAWLTANVS YMRKIIERDL KQSEDFNNST NELLMDALVR
860 870 880 890 900
KMLVLENGTQ KPLLGHAREQ AVRKELQNHS ITELCLENYA SVVLRVKKKR
910 920 930 940 950
YMCLYHEPDD DVIGKSDVKV RGTLGSKSCA LGPAARIESD TRKIIMMGYA
960 970 980 990 1000
VRLKCDDFDF YEATPQDTIQ AGDVILAGSG EWRTVSTVQH ANYGRYTAVK
1010 1020 1030 1040 1050
LMYANGCSDC YVLKKDINLT HLISLDDQEA RRVKYMTCCK FINFIYSSCF
1060 1070 1080 1090 1100
NKDWWSLIEY KSSGQMSKAF TDQRSRLKLP PTKSGKIPMI ILDKSSHGQR
1110 1120 1130 1140 1150
VYNSMQMRKI DNWFQQDPIA TFFNRYLFST KSEILERDIF TSSHCSDIVR
1160 1170 1180 1190 1200
TAEKLLQTWQ DTRPWEDEDS IHRDVVKTVL LQTIAVDTGE NFLGLVMLDS
1210 1220 1230 1240 1250
IVPQRVTKIN FKKVALDVAA QAGTWVRLME DMRTAGKAAH IRVYNQIPPN
1260 1270 1280 1290 1300
LLLYELKRKS TSRYDGDLFP ISRYIPNQVD LEKALDKTCS EAFGDVSNIL
1310 1320 1330 1340 1350
VEIEEERNET IILHYKDKMY KMLGSETDSK PLIACARASY LYTLLKGNKE
1360
QDHTHSKPPK KQRITF
Length:1,366
Mass (Da):156,162
Last modified:August 30, 2017 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iFAEE7D9039C76CF3
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
KX832224 Genomic DNA Translation: ARR28889.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KX832224 Genomic DNA Translation: ARR28889.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

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SWISS-MODEL-Workspacei
Submit a new modelling project...

Family and domain databases

InterProiView protein in InterPro
IPR006172, DNA-dir_DNA_pol_B
IPR006134, DNA-dir_DNA_pol_B_multi_dom
IPR043502, DNA/RNA_pol_sf
IPR012337, RNaseH-like_sf
PfamiView protein in Pfam
PF00136, DNA_pol_B, 1 hit
PRINTSiPR00106, DNAPOLB
SMARTiView protein in SMART
SM00486, POLBc, 1 hit
SUPFAMiSSF53098, SSF53098, 1 hit
SSF56672, SSF56672, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A1X9T5B1_9VIRU
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A1X9T5B1
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: August 30, 2017
Last sequence update: August 30, 2017
Last modified: September 29, 2021
This is version 17 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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