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Protein
Submitted name:

cell adhesion molecule 3

Gene

cadm3

Organism
Scleropages formosus (Asian bonytongue)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
cell adhesion molecule 3Imported
Gene namesi
Name:cadm3Imported
OrganismiScleropages formosus (Asian bonytongue)Imported
Taxonomic identifieri113540 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOsteoglossocephalaOsteoglossomorphaOsteoglossiformesOsteoglossidaeScleropages
Proteomesi
  • UP000192224 Componenti: Genome assembly

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei354 – 378HelicalSequence analysisAdd BLAST25

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 27Sequence analysisAdd BLAST27
ChainiPRO_501072732828 – 413Sequence analysisAdd BLAST386

Keywords - PTMi

Disulfide bondSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini35 – 139Ig-likeInterPro annotationAdd BLAST105
Domaini147 – 242Ig-likeInterPro annotationAdd BLAST96
Domaini247 – 332Ig-likeInterPro annotationAdd BLAST86

Keywords - Domaini

Immunoglobulin domainSAAS annotation, RepeatSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

KOiK06780

Family and domain databases

Gene3Di2.60.40.10, 3 hits
InterProiView protein in InterPro
IPR013162 CD80_C2-set
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR003597 Ig_C1-set
IPR003599 Ig_sub
IPR003598 Ig_sub2
IPR013106 Ig_V-set
IPR003585 Neurexin-like
PfamiView protein in Pfam
PF08205 C2-set_2, 1 hit
PF07686 V-set, 1 hit
SMARTiView protein in SMART
SM00294 4.1m, 1 hit
SM00409 IG, 3 hits
SM00407 IGc1, 1 hit
SM00408 IGc2, 3 hits
SM00406 IGv, 1 hit
SUPFAMiSSF48726 SSF48726, 3 hits
PROSITEiView protein in PROSITE
PS50835 IG_LIKE, 3 hits

Sequencei

Sequence statusi: Complete.

A0A1W5AKH1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKVMASPASP LLWTLWSFSI FAASLQSDYF STQFPSAGSV EEDPFQPVAS
60 70 80 90 100
NEMVPVGGTV TLTCRVKESD NSTLQWTNTA QQTLYFGEKR ALRDNRIQLH
110 120 130 140 150
RSTPTELSIT ISDVQLSDEG EYTCAIFTMP VRTARATVTV LGVPGNPQIS
160 170 180 190 200
GYEDPVREGE TVTLTCTTTR SKPPANIHWF RGSEKLEDMP DLVEEDPEDR
210 220 230 240 250
TFQVSSKLEL QVTQADNDAP VACVVEHPSL APGNKRTEQR LSVQYPPVVH
260 270 280 290 300
IRPESDLPRE GEKFHLQCVG VGNPEPTSYE WEKKDGELPP LTKVDGSFLR
310 320 330 340 350
FELLNKSDNG VYLCQANNGI GQGQGEYTLL VQDTADSAAD PTAMSTSSGV
360 370 380 390 400
DHAVIGGVVA VIVFILLCLL IVLGRYLIRH KGTYLTHEAK GSDDAPDADT
410
AIINAEGGHS GAD
Length:413
Mass (Da):44,999
Last modified:June 7, 2017 - v1
Checksum:iAF8D3F2EEE827F2A
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei413Imported1

Sequence databases

RefSeqiXP_018613525.1, XM_018758009.1

Genome annotation databases

GeneIDi108937835
KEGGisfm:108937835

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_018613525.1, XM_018758009.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi108937835
KEGGisfm:108937835

Organism-specific databases

CTDi57863

Phylogenomic databases

KOiK06780

Family and domain databases

Gene3Di2.60.40.10, 3 hits
InterProiView protein in InterPro
IPR013162 CD80_C2-set
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR003597 Ig_C1-set
IPR003599 Ig_sub
IPR003598 Ig_sub2
IPR013106 Ig_V-set
IPR003585 Neurexin-like
PfamiView protein in Pfam
PF08205 C2-set_2, 1 hit
PF07686 V-set, 1 hit
SMARTiView protein in SMART
SM00294 4.1m, 1 hit
SM00409 IG, 3 hits
SM00407 IGc1, 1 hit
SM00408 IGc2, 3 hits
SM00406 IGv, 1 hit
SUPFAMiSSF48726 SSF48726, 3 hits
PROSITEiView protein in PROSITE
PS50835 IG_LIKE, 3 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1W5AKH1_9TELE
AccessioniPrimary (citable) accession number: A0A1W5AKH1
Entry historyiIntegrated into UniProtKB/TrEMBL: June 7, 2017
Last sequence update: June 7, 2017
Last modified: February 28, 2018
This is version 7 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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