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Protein
Submitted name:

transmembrane and coiled-coil domain-containing protein 3

Gene

tmco3

Organism
Scleropages formosus (Asian bonytongue)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
transmembrane and coiled-coil domain-containing protein 3Imported
Gene namesi
Name:tmco3Imported
OrganismiScleropages formosus (Asian bonytongue)Imported
Taxonomic identifieri113540 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOsteoglossocephalaOsteoglossomorphaOsteoglossiformesOsteoglossidaeScleropages
Proteomesi
  • UP000192224 Componenti: Genome assembly

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei285 – 305HelicalSequence analysisAdd BLAST21
Transmembranei317 – 334HelicalSequence analysisAdd BLAST18
Transmembranei346 – 363HelicalSequence analysisAdd BLAST18
Transmembranei407 – 429HelicalSequence analysisAdd BLAST23
Transmembranei450 – 473HelicalSequence analysisAdd BLAST24
Transmembranei493 – 512HelicalSequence analysisAdd BLAST20
Transmembranei519 – 536HelicalSequence analysisAdd BLAST18
Transmembranei548 – 568HelicalSequence analysisAdd BLAST21
Transmembranei575 – 596HelicalSequence analysisAdd BLAST22
Transmembranei635 – 654HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 16Sequence analysisAdd BLAST16
ChainiPRO_501066958617 – 671Sequence analysisAdd BLAST655

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini270 – 654Na_H_ExchangerInterPro annotationAdd BLAST385

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili126 – 153Sequence analysisAdd BLAST28
Coiled coili171 – 198Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

Gene3Di1.20.1530.20, 1 hit
InterProiView protein in InterPro
IPR006153 Cation/H_exchanger
IPR038770 Na+/solute_symporter_sf
PfamiView protein in Pfam
PF00999 Na_H_Exchanger, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1W5AAR8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MMWALCALFC LGLVGALQQE QVAQHAIKLH RGKGAAVTQG RRWLAEHCRR
60 70 80 90 100
LAGLLRQKSA AVKKLGSAIA AVERDGTLSD PEKLFQVHTL EIFQKELNES
110 120 130 140 150
EKSVFQAVLG LQRALQGDYR DVVNMKESSR QRLEALREAA IKEEQEYVEL
160 170 180 190 200
IAAEKHQQEA MKSVQGQNKT LSMLDEILDD VRRAADRLEE EIEDHAFDYN
210 220 230 240 250
KQMKGVNVEA VLRVEEDEED SQRNVSRREV EDNLGLSMLI DSQNNQYVLT
260 270 280 290 300
KPRDSTMPRA DHHFIKDLVS VVIFSLPCGW LCAQIGLPTM FGYIICGVLL
310 320 330 340 350
GPSGLNSIKS IVQVETLGEF GVFFTLFVVG LEFSPDRLRK VWKISVQGPC
360 370 380 390 400
YIMLLMVGVG LLWGQMLRIR ATQTIFISTC LSLSSTPLVS RFLAGGPRTD
410 420 430 440 450
KEGELEYSSV LLGMLVMQDV QLGLFIAVLP TLIQAGEEGP GSVFMGGLRV
460 470 480 490 500
LMLLGQVLSS LVAVLLLCAA VKAYLIGPFY KKLHAECKGS KEILVLGTTA
510 520 530 540 550
FVFLMLTVTE FLDISMELGC FLAGALLSSQ GHIVTAEVLS CIEPIRDFLA
560 570 580 590 600
IIFFASIGLH VFPTFVLYEL TILMVLTFSL VIMKFLIAML VLSVILPHEI
610 620 630 640 650
RHMRWIVSAG LAQVSEFSFV LGSRARRAGI ISREVYLLIL SVTTLSLLLA
660 670
PVLWRAAILK CVPRVERKTV T
Length:671
Mass (Da):74,515
Last modified:June 7, 2017 - v1
Checksum:iD2CD94CAD85AD2F1
GO

Sequence databases

RefSeqiXP_018612917.1, XM_018757401.1
XP_018612925.1, XM_018757409.1
XP_018612934.1, XM_018757418.1

Genome annotation databases

GeneIDi108937432
KEGGisfm:108937432

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_018612917.1, XM_018757401.1
XP_018612925.1, XM_018757409.1
XP_018612934.1, XM_018757418.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi108937432
KEGGisfm:108937432

Organism-specific databases

CTDi55002

Family and domain databases

Gene3Di1.20.1530.20, 1 hit
InterProiView protein in InterPro
IPR006153 Cation/H_exchanger
IPR038770 Na+/solute_symporter_sf
PfamiView protein in Pfam
PF00999 Na_H_Exchanger, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1W5AAR8_9TELE
AccessioniPrimary (citable) accession number: A0A1W5AAR8
Entry historyiIntegrated into UniProtKB/TrEMBL: June 7, 2017
Last sequence update: June 7, 2017
Last modified: May 23, 2018
This is version 6 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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