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Protein
Submitted name:

probable E3 ubiquitin-protein ligase makorin-2

Gene

mkrn2

Organism
Scleropages formosus (Asian bonytongue)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri3 – 30C3H1-typePROSITE-ProRule annotationAdd BLAST28
Zinc fingeri32 – 59C3H1-typePROSITE-ProRule annotationAdd BLAST28
Zinc fingeri167 – 189C3H1-typePROSITE-ProRule annotationAdd BLAST23
Zinc fingeri318 – 347C3H1-typePROSITE-ProRule annotationAdd BLAST30

GO - Molecular functioni

Keywordsi

Molecular functionLigaseImported
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
probable E3 ubiquitin-protein ligase makorin-2Imported
Gene namesi
Name:mkrn2Imported
OrganismiScleropages formosus (Asian bonytongue)Imported
Taxonomic identifieri113540 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOsteoglossocephalaOsteoglossomorphaOsteoglossiformesOsteoglossidaeScleropages
Proteomesi
  • UP000192224 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 30C3H1-typeInterPro annotationAdd BLAST28
Domaini32 – 59C3H1-typeInterPro annotationAdd BLAST28
Domaini167 – 189C3H1-typeInterPro annotationAdd BLAST23
Domaini235 – 289RING-typeInterPro annotationAdd BLAST55
Domaini318 – 347C3H1-typeInterPro annotationAdd BLAST30

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri3 – 30C3H1-typePROSITE-ProRule annotationAdd BLAST28
Zinc fingeri32 – 59C3H1-typePROSITE-ProRule annotationAdd BLAST28
Zinc fingeri167 – 189C3H1-typePROSITE-ProRule annotationAdd BLAST23
Zinc fingeri318 – 347C3H1-typePROSITE-ProRule annotationAdd BLAST30

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

KOiK15687

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR026293 Makorin_2
IPR018957 Znf_C3HC4_RING-type
IPR000571 Znf_CCCH
IPR036855 Znf_CCCH_sf
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
IPR017907 Znf_RING_CS
PANTHERiPTHR11224:SF17 PTHR11224:SF17, 1 hit
PfamiView protein in Pfam
PF00097 zf-C3HC4, 1 hit
PF00642 zf-CCCH, 2 hits
SMARTiView protein in SMART
SM00184 RING, 1 hit
SM00356 ZnF_C3H1, 4 hits
SUPFAMiSSF90229 SSF90229, 2 hits
PROSITEiView protein in PROSITE
PS50103 ZF_C3H1, 4 hits
PS00518 ZF_RING_1, 1 hit
PS50089 ZF_RING_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1W4ZHU8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTSTKQVTCR YFLHGVCREG PRCLFSHDLS ASKPSTACRF YLKGACAYGE
60 70 80 90 100
RCRYDHIKPP AGRGTSATTD QTSRGGSVTT PVAVSGSSAG LARRGKKPLV
110 120 130 140 150
LKDRALGIGT EERTTPDGRN SRALQERESW EYWEEGAQAK PHSYLEAIRT
160 170 180 190 200
GLEASPNEMP FADLQLLCPY AAAGHCHYGS SCSYLHGDKC DICQLQVLHP
210 220 230 240 250
YDPEQRRAHE KMCMVAFEAD MEKAFAAQFS QDKVCSICME VVYEKATPSE
260 270 280 290 300
RRFGILSSCS HTYCLGCIRQ WRCAKQFENK IVKSCPECRV VSEFVIPSVF
310 320 330 340 350
WVEDQEQKNR LIEEFKAGVS KKACKYFDQG RGTCPFGGKC LYLHAYPDGT
360 370 380 390 400
RAEPEKPRKQ LGSEGNVRFL NSVRLWDFIE EREHRTTSQY DDEVSELGDL
410
FMQLSGAGEE GGVPVPH
Length:417
Mass (Da):46,704
Last modified:June 7, 2017 - v1
Checksum:iF9E9E0D11062531C
GO

Sequence databases

RefSeqiXP_018600111.1, XM_018744595.1

Genome annotation databases

GeneIDi108929808
KEGGisfm:108929808

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_018600111.1, XM_018744595.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi108929808
KEGGisfm:108929808

Organism-specific databases

CTDi23609

Phylogenomic databases

KOiK15687

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR026293 Makorin_2
IPR018957 Znf_C3HC4_RING-type
IPR000571 Znf_CCCH
IPR036855 Znf_CCCH_sf
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
IPR017907 Znf_RING_CS
PANTHERiPTHR11224:SF17 PTHR11224:SF17, 1 hit
PfamiView protein in Pfam
PF00097 zf-C3HC4, 1 hit
PF00642 zf-CCCH, 2 hits
SMARTiView protein in SMART
SM00184 RING, 1 hit
SM00356 ZnF_C3H1, 4 hits
SUPFAMiSSF90229 SSF90229, 2 hits
PROSITEiView protein in PROSITE
PS50103 ZF_C3H1, 4 hits
PS00518 ZF_RING_1, 1 hit
PS50089 ZF_RING_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1W4ZHU8_9TELE
AccessioniPrimary (citable) accession number: A0A1W4ZHU8
Entry historyiIntegrated into UniProtKB/TrEMBL: June 7, 2017
Last sequence update: June 7, 2017
Last modified: May 23, 2018
This is version 10 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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