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Protein
Submitted name:

T-box transcription factor TBX3

Gene

tbx3

Organism
Scleropages formosus (Asian bonytongue)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
T-box transcription factor TBX3Imported
Gene namesi
Name:tbx3Imported
OrganismiScleropages formosus (Asian bonytongue)Imported
Taxonomic identifieri113540 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOsteoglossocephalaOsteoglossomorphaOsteoglossiformesOsteoglossidaeScleropages
Proteomesi
  • UP000192224 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini247 – 318TBXInterPro annotationAdd BLAST72

Phylogenomic databases

KOiK10177

Family and domain databases

CDDicd00182 TBOX, 1 hit
Gene3Di2.60.40.820, 1 hit
InterProiView protein in InterPro
IPR008967 p53-like_TF_DNA-bd
IPR036960 T-box_sf
IPR022582 TBX
IPR002070 TF_Brachyury
IPR001699 TF_T-box
IPR018186 TF_T-box_CS
PANTHERiPTHR11267 PTHR11267, 2 hits
PfamiView protein in Pfam
PF00907 T-box, 1 hit
PF12598 TBX, 1 hit
PRINTSiPR00938 BRACHYURY
PR00937 TBOX
SMARTiView protein in SMART
SM00425 TBOX, 1 hit
SUPFAMiSSF49417 SSF49417, 1 hit
PROSITEiView protein in PROSITE
PS01283 TBOX_1, 1 hit
PS01264 TBOX_2, 1 hit
PS50252 TBOX_3, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1W4Z6T8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSFPMRDPVI PGTSMAYHPF LPHRAPDFAH LRPLKALEPE EDVEDDPKVH
60 70 80 90 100
LEAKDLWEQF HKRGTEMVIT KSGRRMFPPF KVRCSGLDKK AKYILLMDIV
110 120 130 140 150
AADDCRYKFH NSRWMVAGKA DPEMPKRMYI HPDSPATGEQ WMSKVVNFHK
160 170 180 190 200
LKLTNNISDK HGFTILNSMH KYQPRFHIVR ANDILKLPYS TFRTYVFPET
210 220 230 240 250
EFIAVTAYQN DKITQLKIDN NPFAKGFRDT GNGRREKRKQ LALQSLRSYE
260 270 280 290 300
EQHKKDSGTS EDSDPASLKC FGPASAVGGS ALKEVCESDE DSDEESKDGS
310 320 330 340 350
PQDGQDSSKI STTTEDGRDD GALATKAHLL TNSVGAGRER EKAPRTEKSH
360 370 380 390 400
ADSRQSPVTI TSSTMRSLGG DELKSPTREP PKADDCRSMS KENYMPLTVQ
410 420 430 440 450
TDSSAQISQG HLHNFGFPPG LAGQQFFNPL GGAHPFLLHP SQFNMGGAFS
460 470 480 490 500
NMAAAGMGPL LAAVSSGGVN TMDTTSITSP PQGLAGTPGL PFHLQQHVLA
510 520 530 540 550
SQGLAMSPFG GLFPYPYNYM AAAAAASSAA SSSVHRHPFL NAVRPRLRYS
560 570 580 590 600
PYSLPMGVPD SSSLLTTALP SVTGSSEDLK GGGGMATSPG PGALDSTSDL
610 620 630 640 650
NSRSPTRSSG SVSISPKGGP QKDAANELQS IQRLVSGLDS QQDRPRSMSP
Length:650
Mass (Da):70,638
Last modified:June 7, 2017 - v1
Checksum:i7D4351F98F9A34B5
GO

Sequence databases

RefSeqiXP_018596408.1, XM_018740892.1

Genome annotation databases

GeneIDi108927525
KEGGisfm:108927525

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_018596408.1, XM_018740892.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi108927525
KEGGisfm:108927525

Organism-specific databases

CTDi6926

Phylogenomic databases

KOiK10177

Family and domain databases

CDDicd00182 TBOX, 1 hit
Gene3Di2.60.40.820, 1 hit
InterProiView protein in InterPro
IPR008967 p53-like_TF_DNA-bd
IPR036960 T-box_sf
IPR022582 TBX
IPR002070 TF_Brachyury
IPR001699 TF_T-box
IPR018186 TF_T-box_CS
PANTHERiPTHR11267 PTHR11267, 2 hits
PfamiView protein in Pfam
PF00907 T-box, 1 hit
PF12598 TBX, 1 hit
PRINTSiPR00938 BRACHYURY
PR00937 TBOX
SMARTiView protein in SMART
SM00425 TBOX, 1 hit
SUPFAMiSSF49417 SSF49417, 1 hit
PROSITEiView protein in PROSITE
PS01283 TBOX_1, 1 hit
PS01264 TBOX_2, 1 hit
PS50252 TBOX_3, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1W4Z6T8_9TELE
AccessioniPrimary (citable) accession number: A0A1W4Z6T8
Entry historyiIntegrated into UniProtKB/TrEMBL: June 7, 2017
Last sequence update: June 7, 2017
Last modified: September 12, 2018
This is version 8 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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