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Protein

Condensin complex subunit 1

Gene

ncapd2

Organism
Scleropages formosus (Asian bonytongue)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.UniRule annotation

GO - Biological processi

Keywordsi

Biological processCell cycle, Cell division, DNA condensationUniRule annotation, MitosisUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Condensin complex subunit 1UniRule annotation
Gene namesi
Name:ncapd2Imported
OrganismiScleropages formosus (Asian bonytongue)Imported
Taxonomic identifieri113540 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOsteoglossocephalaOsteoglossomorphaOsteoglossiformesOsteoglossidaeScleropages
Proteomesi
  • UP000192224 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini72 – 235Cnd1_NInterPro annotationAdd BLAST164
Domaini1064 – 1224Cnd1InterPro annotationAdd BLAST161

Sequence similaritiesi

Belongs to the CND1 (condensin subunit 1) family.UniRule annotation

Phylogenomic databases

KOiK06677

Family and domain databases

Gene3Di1.25.10.10, 1 hit
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR026971 CND1/NCAPD3
IPR032682 Cnd1_C
IPR007673 Condensin_cplx_su1
IPR024324 Condensin_cplx_su1_N
PANTHERiPTHR14222 PTHR14222, 1 hit
PTHR14222:SF2 PTHR14222:SF2, 1 hit
PfamiView protein in Pfam
PF12717 Cnd1, 1 hit
PF12922 Cnd1_N, 1 hit
PIRSFiPIRSF017127 Condensin_D2, 1 hit
SUPFAMiSSF48371 SSF48371, 4 hits

Sequencei

Sequence statusi: Complete.

A0A1W4YXE0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWDFSVPVCV DDLLKTGGVN QYVVQDVLSS KQIPVFLHNF KAALRSQGPL
60 70 80 90 100
CILEHFDTPF SVLRHFQSLD LAVKEDTLEL LVQVVSSLSV SLPSLLLSTS
110 120 130 140 150
LSAVDKKQQL NAVKMSVFLL CKLAESLESD SYRQSIITAP SKGTKKGRAS
160 170 180 190 200
NDTQMQWDTE RETVLQALAQ LLQLDIRSLW SLSLVEEEFV SCVTCCCYKL
210 220 230 240 250
LENPTISHVK SKPTRDAIIH LLGVLIKKYN HLLGASVKVI QLLQHFEQLS
260 270 280 290 300
SVCAQAVSVW CTEYGVKAIV GEVMREIGQK PSEELNREGS GVKAFSCFLS
310 320 330 340 350
ELSTLVPETM IPNISVLLTH LEGESPSLRV AVCEVLGEVL VRVLSGDGLN
360 370 380 390 400
ESGRTDRDRF LDTLQEHLHD THSHVRSRVL QVYARIVNSK ALPLCKYNQV
410 420 430 440 450
MTLAVGRLMD KSVNVCKSAI QLLAAFIAHN PYSCKLSSAD LKKPLEKETA
460 470 480 490 500
KLRELREKRK AKNPVPVIEA GELWAAMEPE LLQTTRAEMV LASEDGECDK
510 520 530 540 550
DGDQEINADE SDKATALKIV QFLRVNKYRQ AIKLCVRAHS VFPKSHLFSG
560 570 580 590 600
LSPLTTESVM DMLALLFKGP EESSLEPQDQ QPLAEEDNEG GQSEVEENEL
610 620 630 640 650
KKQEMLVQYL RDTESFVLQV EKAIAVINTM LYWKTTTVVQ EAIQFCVTVC
660 670 680 690 700
EFSVAHSLSG VRKMLPLVWS TDVAVKDAVV QAYKRLYLNP QGDTARVKSL
710 720 730 740 750
TLVNSLSELM VDASLGTIQC LEEIVQEFFS GGSALQCSVV QVLWERFTGK
760 770 780 790 800
QESSALHRRA AVLLLGMAAR AEREVVLSNL DTLCCVALGE KVTEDFLLAR
810 820 830 840 850
DAVVTISSIT DQNRSSKGAP PFRLPQDHQL FSCLTQAIAE GIVMTDPYWH
860 870 880 890 900
TFMEQAVRLI YNLAESPDQL CSRLLQRCSR LLLDQITERE QGNRDSFQGA
910 920 930 940 950
SQSASQSDEE QEEQISCVSL AQLFALCGCV AFWQVSYLER SVSAELRRRR
960 970 980 990 1000
GAKEENDPAL KAKQASSDSC MEEELGLVGA SAEDTEAELI RKICETELLA
1010 1020 1030 1040 1050
EENLLSAFLP LLIKVCSSPG RYSHPQLTTA ACLALAQFMM ISPTICEENI
1060 1070 1080 1090 1100
RLLFTVLEKA SLPVVRSNTL IALGDLTVRF PNILEPWTQN LYARLNDDSP
1110 1120 1130 1140 1150
SVRQTAVTVL TQLVLKDVLK VKGHVSEVAV LLIDAQPDIA NLALNFFNEL
1160 1170 1180 1190 1200
ASKDNAIYNL LPDIISRLSD PERGMNKEDF HTIMKQLFSY ITKEKQTESL
1210 1220 1230 1240 1250
VEKLCQRFRT AKTERQWCDL AVSLSLLSMC ERGFKRLQEC WECYSDKLSD
1260 1270 1280 1290 1300
PDVYQPLLSI VTRLRRGAKP QFKTQVEEFE KKLTAVHTKG LENVESREME
1310 1320 1330 1340 1350
ERLEAGVGEA EQGPCTPAAV GRRARRPTRG KGKASTSNHD TSDFVTPKLR
1360 1370 1380 1390
RKPHKKTLIT FSSDEEDDEV LLAENETPKV TTPISRCSRR TRLRH
Length:1,395
Mass (Da):155,828
Last modified:June 7, 2017 - v1
Checksum:i75421813D1BBC37D
GO

Sequence databases

RefSeqiXP_018593093.1, XM_018737577.1

Genome annotation databases

GeneIDi108925548
KEGGisfm:108925548

Similar proteinsi

Entry informationi

Entry nameiA0A1W4YXE0_9TELE
AccessioniPrimary (citable) accession number: A0A1W4YXE0
Entry historyiIntegrated into UniProtKB/TrEMBL: June 7, 2017
Last sequence update: June 7, 2017
Last modified: February 28, 2018
This is version 6 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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