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Protein
Submitted name:

integrin alpha-9 isoform X1

Gene

itga9

Organism
Scleropages formosus (Asian bonytongue)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Biological processi

Keywordsi

Molecular functionIntegrinUniRule annotationSAAS annotationImported, ReceptorUniRule annotationSAAS annotation
Biological processCell adhesionUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
integrin alpha-9 isoform X1Imported
Gene namesi
Name:itga9Imported
OrganismiScleropages formosus (Asian bonytongue)Imported
Taxonomic identifieri113540 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOsteoglossocephalaOsteoglossomorphaOsteoglossiformesOsteoglossidaeScleropages
Proteomesi
  • UP000192224 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei975 – 999HelicalUniRule annotationAdd BLAST25

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 30UniRule annotationAdd BLAST30
ChainiPRO_501060210131 – 1032UniRule annotationAdd BLAST1002

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati32 – 97FG-GAPPROSITE-ProRule annotationAdd BLAST66
Repeati112 – 175FG-GAPPROSITE-ProRule annotationAdd BLAST64
Repeati183 – 232FG-GAPPROSITE-ProRule annotationAdd BLAST50
Repeati234 – 288FG-GAPPROSITE-ProRule annotationAdd BLAST55
Repeati289 – 348FG-GAPPROSITE-ProRule annotationAdd BLAST60
Repeati349 – 405FG-GAPPROSITE-ProRule annotationAdd BLAST57
Repeati410 – 473FG-GAPPROSITE-ProRule annotationAdd BLAST64
Domaini458 – 892Integrin_alpha2InterPro annotationAdd BLAST435

Sequence similaritiesi

Belongs to the integrin alpha chain family.UniRule annotationSAAS annotation

Keywords - Domaini

RepeatSAAS annotation, SignalUniRule annotation, Transmembrane, Transmembrane helixUniRule annotationSAAS annotation

Phylogenomic databases

KOiK06585

Family and domain databases

Gene3Di2.130.10.130, 1 hit
InterProiView protein in InterPro
IPR013517 FG-GAP
IPR013519 Int_alpha_beta-p
IPR000413 Integrin_alpha
IPR013649 Integrin_alpha-2
IPR018184 Integrin_alpha_C_CS
IPR028994 Integrin_alpha_N
IPR032695 Integrin_dom_sf
PfamiView protein in Pfam
PF01839 FG-GAP, 2 hits
PF08441 Integrin_alpha2, 1 hit
PRINTSiPR01185 INTEGRINA
SMARTiView protein in SMART
SM00191 Int_alpha, 5 hits
SUPFAMiSSF69179 SSF69179, 3 hits
PROSITEiView protein in PROSITE
PS51470 FG_GAP, 7 hits
PS00242 INTEGRIN_ALPHA, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1W4YNW2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEKMSVKMS EPVWFPGFCV LLLWLSAASS YNLDTEHKLL YRGPHGAFFG
60 70 80 90 100
FSVLQHQHDN THWILVGAPR SNSTFSSSVK SPGAVLKCRV RSNPEHRCTE
110 120 130 140 150
MDLGRGNKRR ESCGKTCQAD REDEWMGISL ARQDGTGGKV LACAHRWKNV
160 170 180 190 200
FYESEQILPH GYCSVISPSL QGHTRALIPC YEAYKKTYGE EHGSCQAGIA
210 220 230 240 250
GVFTEELIVM GAPGSYYWTG TVKVLNLTSG SYYSLDKGAA SSERYSYLGY
260 270 280 290 300
AVTAGHFSSA TATDIVGGAP RDGGGGKVYI FRIEGGALVK MFQASGRMMG
310 320 330 340 350
SYFGSSLCAV DLNQDGLSDL LVGAPMHSEL RDEGQVVVYL NRGSGLMEEM
360 370 380 390 400
GVLTGDRAYD AHFGECIASL GDIDDDGYQD VAIGAPKEDD YAGAVYIYHG
410 420 430 440 450
DVDGVIGIYS TKLSGRRIHP SLRMFGQSIS GGVDMDRNGY PDVTVGAFMS
460 470 480 490 500
DNVVMLWSRP VITVDVSIFL PPSISITAPE CSDSSQHLNC LNVTLCLRFH
510 520 530 540 550
GKQVPGQIEL LYNLTADVEK RSKSQQTRVL FALNGDLMGT VSGVVHLLSG
560 570 580 590 600
KEACQTYVAY VRKEVKDVFS PIVFEAAYGL GRHVVEEPQD RELPQLSPVL
610 620 630 640 650
RWRKGDRMAQ RNKTWFEKNC LSDDCAADLR LQGQLLLPGV PRRPYLALGG
660 670 680 690 700
VRNISLNLSI SNAGDDAYDT NIFFNFSREL YFIKMWQKEE KGISCELAEP
710 720 730 740 750
DFLRCSVGFP FMRAQTTYHL AVIFDTSRLS GENDTLRFRV SAQSANPEHD
760 770 780 790 800
SKLADNTLEL SIPLVHEVDT TITGTVTPAS FIYGNSMDPA RFVQLDDMEC
810 820 830 840 850
SFQPLNLTFQ VINNGPSRLP AATVDVRIPN RLVGSGADML HVLESQVAGD
860 870 880 890 900
RGNCTSHNNP MPCTVPQDRE SIFHTIFAFF TKSGRRVLDC DRPGRSCLMI
910 920 930 940 950
TCAIGSLSKE ESASVDMRIL LNTELLKRDS SSVIQLVSRA GVRVDPVAVE
960 970 980 990 1000
VPSGLPEDVS VVFEALHNQE PRGYVVGWII AISLLVGILI FLLLAVLLWK
1010 1020 1030
MGFFRRRYKE IIEAEKSRKD SDESWDWVQR SQ
Length:1,032
Mass (Da):113,882
Last modified:June 7, 2017 - v1
Checksum:iE6397C17B15FB602
GO

Sequence databases

RefSeqiXP_018590120.1, XM_018734604.1

Genome annotation databases

GeneIDi108923686
KEGGisfm:108923686

Similar proteinsi

Entry informationi

Entry nameiA0A1W4YNW2_9TELE
AccessioniPrimary (citable) accession number: A0A1W4YNW2
Entry historyiIntegrated into UniProtKB/TrEMBL: June 7, 2017
Last sequence update: June 7, 2017
Last modified: February 28, 2018
This is version 6 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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