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Protein

Homeobox protein cut-like

Gene

cux1

Organism
Scleropages formosus (Asian bonytongue)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi1086 – 1145HomeoboxPROSITE-ProRule annotationAdd BLAST60

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation
Biological processTranscription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Homeobox protein cut-likeUniRule annotation
Gene namesi
Name:cux1Imported
OrganismiScleropages formosus (Asian bonytongue)Imported
Taxonomic identifieri113540 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOsteoglossocephalaOsteoglossomorphaOsteoglossiformesOsteoglossidaeScleropages
Proteomesi
  • UP000192224 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini552 – 639CUTInterPro annotationAdd BLAST88
Domaini804 – 891CUTInterPro annotationAdd BLAST88
Domaini958 – 1045CUTInterPro annotationAdd BLAST88
Domaini1084 – 1144HomeoboxInterPro annotationAdd BLAST61

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili17 – 37Sequence analysisAdd BLAST21
Coiled coili68 – 88Sequence analysisAdd BLAST21
Coiled coili112 – 196Sequence analysisAdd BLAST85
Coiled coili201 – 228Sequence analysisAdd BLAST28
Coiled coili237 – 274Sequence analysisAdd BLAST38
Coiled coili296 – 330Sequence analysisAdd BLAST35
Coiled coili335 – 372Sequence analysisAdd BLAST38
Coiled coili1281 – 1301Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the CUT homeobox family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis, HomeoboxPROSITE-ProRule annotation

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR003350 CUT_dom
IPR009057 Homeobox-like_sf
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
IPR010982 Lambda_DNA-bd_dom_sf
PfamiView protein in Pfam
PF02376 CUT, 3 hits
PF00046 Homeobox, 1 hit
SMARTiView protein in SMART
SM01109 CUT, 3 hits
SM00389 HOX, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
SSF47413 SSF47413, 3 hits
PROSITEiView protein in PROSITE
PS51042 CUT, 3 hits
PS00027 HOMEOBOX_1, 1 hit
PS50071 HOMEOBOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1W4Y968-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAANAGSMFQ YWKRFDLQQL QRELDATATV LANRQDESEQ SRKKLIDQSR
60 70 80 90 100
EFKKNTPEDL RKQVAPLLKS FQAEIDALSK RSKEAEAAFL NVYKRLIDVP
110 120 130 140 150
DPVPALEAGQ QLQQKVQRMH DVETENQKLR ETLEEYNKEF AEVKNQEVTI
160 170 180 190 200
KALKEKIREY EQTLRSQAES LAQQKEQQLH SDYAEKERKL QETQASMSSR
210 220 230 240 250
LEEANHKAQS LQSALETTQA ELFDLKTKYD EETTAKADEI EMVMTDLERA
260 270 280 290 300
NQRAEVAERE ASTLREQLTS ANKSLQLATQ IQKAPNMEEA MEVLSRSSLE
310 320 330 340 350
VELSAKEREV VQLVEDVQRL QASLTKLRET SSSQISQLEQ QLNTKNSTLR
360 370 380 390 400
QLEEKLKEQA DYEEVKKELN ILKSMEFGPS EGTTAQDSAK PLEVLLLEKN
410 420 430 440 450
RNLQSENASL RIANSDLSGP AGRKGKEGPV ESLQRTAATA NTGTPPPPSQ
460 470 480 490 500
LLLRPVPEAN GAHPFSPTGM GQDLYGPTSG AAFPPAGKVP LSSLLQRQLM
510 520 530 540 550
HSFYSKALQD SPGGAVLFSP GPYTASPLPQ HQPAASPDPN GLAPSPSQSE
560 570 580 590 600
GAGSASEGED MDTAEIARQV KEQLIKHNIG QRIFGHYVLG LSQGSVSEIL
610 620 630 640 650
ARPKPWSKLT IRGKEPFHKM RQFLSDEQNI LALRSIQGRQ RGNITTRIRT
660 670 680 690 700
PESGSDEAIK SILEQAKREL QVQKTAEPSL PHHSCGGGGR SSGSSSDEAI
710 720 730 740 750
RSILEQARRE MEAQQAALQP LLKGGSSTPP VDSQLPSLRP PLGAPPSLAA
760 770 780 790 800
VSACSPLALS LKKPPVSSTP SPHPDLHPAG IRKEGAELAP SEGVADGGPS
810 820 830 840 850
SVRGGASWSD HWWSTMNPDR RSAPPTAADE NRSHDSPKET LALSQGSVSD
860 870 880 890 900
MLSRPKPWSK MTQKTREPFS RMQPCLNGEP AHSVLPLQGQ QGTLQEGTPK
910 920 930 940 950
TSASCSPAPE SPLSSGEESV RSVGELSGQA QAPEPGDPSD SQPSTPLPVP
960 970 980 990 1000
GHSGLSIQEM VAVSPELDTY VITKKVKEVL TDNNLGQRLF GETILGLTQG
1010 1020 1030 1040 1050
SVSDLLARPK PWHKLSLKGR EPFVRMQLWL SDPRNVEKLM DMKRMEKKAY
1060 1070 1080 1090 1100
MKRRHSSVSE SQPVDSVPTG GDFGPGSSPQ HQQHQLKKPR VVLAPEEKEA
1110 1120 1130 1140 1150
LKRAYQQKPY PSPKTIEELA NQLNLKTSTV INWFHNYRSR IRRELFIEEI
1160 1170 1180 1190 1200
QAGAAGSTGD SREGCSSPTA QTIKVGEGDS CDGTESDSAL ESRPAEASGP
1210 1220 1230 1240 1250
EEGRGAMSEG NGGVTKELSG DGGAGTPGRS PAPPDSAPTD SCAPGTSSRK
1260 1270 1280 1290 1300
EGGVTGLFSF PEATPTTARN PRDSSLRKKK AANLNNIIHR LEKAASREEG

AEWEF
Length:1,305
Mass (Da):142,292
Last modified:June 7, 2017 - v1
Checksum:iA381C9A4525D29D1
GO

Sequence databases

RefSeqiXP_018588087.1, XM_018732571.1

Genome annotation databases

GeneIDi108922449

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_018588087.1, XM_018732571.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi108922449

Organism-specific databases

CTDi1523

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR003350 CUT_dom
IPR009057 Homeobox-like_sf
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
IPR010982 Lambda_DNA-bd_dom_sf
PfamiView protein in Pfam
PF02376 CUT, 3 hits
PF00046 Homeobox, 1 hit
SMARTiView protein in SMART
SM01109 CUT, 3 hits
SM00389 HOX, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
SSF47413 SSF47413, 3 hits
PROSITEiView protein in PROSITE
PS51042 CUT, 3 hits
PS00027 HOMEOBOX_1, 1 hit
PS50071 HOMEOBOX_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1W4Y968_9TELE
AccessioniPrimary (citable) accession number: A0A1W4Y968
Entry historyiIntegrated into UniProtKB/TrEMBL: June 7, 2017
Last sequence update: June 7, 2017
Last modified: April 25, 2018
This is version 9 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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