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Protein

Permease IIC component

Gene

BSK71_09680

Organism
Pectobacterium carotovorum subsp. actinidiae
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.UniRule annotation

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processSugar transportUniRule annotationSAAS annotation, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Permease IIC componentUniRule annotation
Gene namesi
ORF Names:BSK71_09680Imported
OrganismiPectobacterium carotovorum subsp. actinidiaeImported
Taxonomic identifieri1507808 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesPectobacteriaceaePectobacterium
Proteomesi
  • UP000189286 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei31 – 52HelicalSequence analysisAdd BLAST22
Transmembranei72 – 94HelicalSequence analysisAdd BLAST23
Transmembranei106 – 128HelicalSequence analysisAdd BLAST23
Transmembranei148 – 164HelicalSequence analysisAdd BLAST17
Transmembranei185 – 211HelicalSequence analysisAdd BLAST27
Transmembranei231 – 253HelicalSequence analysisAdd BLAST23
Transmembranei293 – 316HelicalSequence analysisAdd BLAST24
Transmembranei391 – 419HelicalSequence analysisAdd BLAST29

GO - Cellular componenti

Keywords - Cellular componenti

Cell membraneUniRule annotationSAAS annotation, Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini7 – 421PTS EIIC type-3InterPro annotationAdd BLAST415

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili424 – 445Sequence analysisAdd BLAST22

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Family and domain databases

InterProiView protein in InterPro
IPR003352 PTS_EIIC
IPR004501 PTS_EIIC_3
IPR004796 PTS_IIC_cello
PfamiView protein in Pfam
PF02378 PTS_EIIC, 1 hit
PIRSFiPIRSF006351 PTS_EIIC-Cellobiose, 1 hit
TIGRFAMsiTIGR00410 lacE, 1 hit
PROSITEiView protein in PROSITE
PS51105 PTS_EIIC_TYPE_3, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1V2R4A8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSFKDQLIDS LGSFANKFNS LRYIMAIKAS FITLMPVIIV GAFSVLISNM
60 70 80 90 100
VMDPKNGLAS FSMFSFLAEL KPIMSGINYA TLSFLTIGAV FLIGIELGKI
110 120 130 140 150
NGSRGLFPGL LAVICFIAVT PTTIEMAVNG QMMVVKDVLA KQFSDTKSLF
160 170 180 190 200
LGMFIAILSV EMYTKLQNVD RLQIKMPDSV PPNVAASFSA LFPSIITVVA
210 220 230 240 250
IATFGFVFHR VTGMYLYDAV YKVVQQPLES VVQSLPGLLV LMFVAQLFWV
260 270 280 290 300
IGIHGNQMIK PIREPLLLGA IAVNMTAFEQ GQEIPNIITM PFWDVYMSIG
310 320 330 340 350
GSGLTIGLLL AVMIASKRKE MKEIAKISFG PSVFNINEPV IFGMPIMLNP
360 370 380 390 400
ILAIPFIITP LVTGTIGYFA TSMGFAGKAV VMVPWTTPPI INAWLSTAGS
410 420 430 440
MGAVATQIVC IIVAMLIYLP FVKVASRRAE LAQLEAEKQA AAEKA
Length:445
Mass (Da):48,243
Last modified:June 7, 2017 - v1
Checksum:iC17C83250D65EF12
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
MPUJ01000005 Genomic DNA Translation: ONK06677.1
RefSeqiWP_039361387.1, NZ_MPUJ01000005.1

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
MPUJ01000005 Genomic DNA Translation: ONK06677.1
RefSeqiWP_039361387.1, NZ_MPUJ01000005.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiView protein in InterPro
IPR003352 PTS_EIIC
IPR004501 PTS_EIIC_3
IPR004796 PTS_IIC_cello
PfamiView protein in Pfam
PF02378 PTS_EIIC, 1 hit
PIRSFiPIRSF006351 PTS_EIIC-Cellobiose, 1 hit
TIGRFAMsiTIGR00410 lacE, 1 hit
PROSITEiView protein in PROSITE
PS51105 PTS_EIIC_TYPE_3, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1V2R4A8_PECCA
AccessioniPrimary (citable) accession number: A0A1V2R4A8
Entry historyiIntegrated into UniProtKB/TrEMBL: June 7, 2017
Last sequence update: June 7, 2017
Last modified: November 7, 2018
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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