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Protein
Submitted name:

histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5-like isoform X1

Gene

LOC107949683

Organism
Gossypium hirsutum (Upland cotton) (Gossypium mexicanum)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionMethyltransferaseImported, Transferase

Names & Taxonomyi

Protein namesi
Submitted name:
histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5-like isoform X1Imported
Gene namesi
Name:LOC107949683Imported
OrganismiGossypium hirsutum (Upland cotton) (Gossypium mexicanum)Imported
Taxonomic identifieri3635 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsMalvalesMalvaceaeMalvoideaeGossypium
Proteomesi
  • UP000189702 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

ChromosomeSAAS annotation, NucleusPROSITE-ProRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini412 – 563YDGInterPro annotationAdd BLAST152
Domaini653 – 712Pre-SETInterPro annotationAdd BLAST60
Domaini715 – 849SETInterPro annotationAdd BLAST135

Phylogenomic databases

KOiK11420

Family and domain databases

Gene3Di2.30.280.10, 1 hit
InterProiView protein in InterPro
IPR007728 Pre-SET_dom
IPR015947 PUA-like_sf
IPR001214 SET_dom
IPR036987 SRA-YDG_sf
IPR003105 SRA_YDG
PfamiView protein in Pfam
PF05033 Pre-SET, 1 hit
PF02182 SAD_SRA, 1 hit
PF00856 SET, 1 hit
SMARTiView protein in SMART
SM00468 PreSET, 1 hit
SM00317 SET, 1 hit
SM00466 SRA, 1 hit
SUPFAMiSSF88697 SSF88697, 1 hit
PROSITEiView protein in PROSITE
PS50867 PRE_SET, 1 hit
PS50280 SET, 1 hit
PS51015 YDG, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.iShow all

A0A1U8NPN3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MVLQFQIDGN VNPSKGNMDP SKFKRRRVSA VRDYPIQAHV HPCSCFPVSI
60 70 80 90 100
KYPPSKIRKG VSVKRDFPVK LDAPAALRNS LSSNASIATN GRDIHACTND
110 120 130 140 150
VKESNLSMVV WEERSELDAS IAINIHLCTD IGDDKPSSVP NIANSRDGYE
160 170 180 190 200
CLKSIKEGFE ESYSSMNIKG EQCAVDIPFA NNIYACIESK QEGVERANVL
210 220 230 240 250
MNIGDDPCEA VVTSFDDYQL ALKDEKSKNL VSLTKEVSSL MLSDEQYSDS
260 270 280 290 300
LFGVDIFQAA FNDDEDYVKE HDSQAAFSDD VVSVKTTLAE EARSLMVSDE
310 320 330 340 350
RCSDSQVAFN DDEDCVKEHD SLAAFSDGEE SVKTTLAEEK NSQVDLSNYE
360 370 380 390 400
VFSNNELIND CDKVKQIINH FRHVYNKLLQ VKSGKLRSGL AVEAAIILQN
410 420 430 440 450
QHKWIKRNKQ FGSISGVEIG DYFFWRAELN IIGLHCRNVH GIDFMKMDGK
460 470 480 490 500
NLAISVVDSG RYDNVFESNN EEFPDTLVYL GEGSNPKVQS KKSIEDQKLK
510 520 530 540 550
GGNLALKNSV EAKNPVRVIR KIFFKRGKVE KRKYIYDGLY FVDSYRQEIA
560 570 580 590 600
SSGKLVFKFL LKRIPSQPKL DWRKLVRELD CMSYNSEGKE RSPICVVNAL
610 620 630 640 650
DDEKPLITDD ISQGKERIPI RAINALDDEK LPIFNYVTSV TYPESYCPSM
660 670 680 690 700
INDGCDCIDG CSDSEDCPCI VKNGGSTYDY EERLFEAKPL IVECGPSCKC
710 720 730 740 750
FTSCLNRVSQ RGIRLPLEVF KTKAKGWGVR SRSFIRRGCF ICEYTGEILR
760 770 780 790 800
DNEGEQRIGN DEYLFDIGVS YGDHSLRDAN SLGSFEGNEC FTIDAARVGN
810 820 830 840 850
VGRFINHSCS PNLFPQSLLF DHDNKRMPHI MLFAMEDIPP LNELTYDYNY
860 870
EKGGVCDANG NIKIKHCYCD SSDCLGRMY
Length:879
Mass (Da):98,913
Last modified:May 10, 2017 - v1
Checksum:iD2133F8574B6A6DC
GO

Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1U8NLJ7A0A1U8NLJ7_GOSHI
histone-lysine N-methyltransferase,...
LOC107949683
736Annotation score:
A0A1U8NM23A0A1U8NM23_GOSHI
histone-lysine N-methyltransferase,...
LOC107949683
856Annotation score:
A0A1U8NLM6A0A1U8NLM6_GOSHI
histone-lysine N-methyltransferase,...
LOC107949683
759Annotation score:

Sequence databases

RefSeqiXP_016739902.1, XM_016884413.1
XP_016739904.1, XM_016884415.1

Genome annotation databases

GeneIDi107949683
KEGGighi:107949683

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_016739902.1, XM_016884413.1
XP_016739904.1, XM_016884415.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi107949683
KEGGighi:107949683

Phylogenomic databases

KOiK11420

Family and domain databases

Gene3Di2.30.280.10, 1 hit
InterProiView protein in InterPro
IPR007728 Pre-SET_dom
IPR015947 PUA-like_sf
IPR001214 SET_dom
IPR036987 SRA-YDG_sf
IPR003105 SRA_YDG
PfamiView protein in Pfam
PF05033 Pre-SET, 1 hit
PF02182 SAD_SRA, 1 hit
PF00856 SET, 1 hit
SMARTiView protein in SMART
SM00468 PreSET, 1 hit
SM00317 SET, 1 hit
SM00466 SRA, 1 hit
SUPFAMiSSF88697 SSF88697, 1 hit
PROSITEiView protein in PROSITE
PS50867 PRE_SET, 1 hit
PS50280 SET, 1 hit
PS51015 YDG, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1U8NPN3_GOSHI
AccessioniPrimary (citable) accession number: A0A1U8NPN3
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2017
Last sequence update: May 10, 2017
Last modified: December 20, 2017
This is version 8 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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