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Protein
Submitted name:

vacuolar-sorting receptor 3-like

Gene

LOC107908842

Organism
Gossypium hirsutum (Upland cotton) (Gossypium mexicanum)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionReceptorImported

Names & Taxonomyi

Protein namesi
Submitted name:
vacuolar-sorting receptor 3-likeImported
Gene namesi
Name:LOC107908842Imported
OrganismiGossypium hirsutum (Upland cotton) (Gossypium mexicanum)Imported
Taxonomic identifieri3635 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsMalvalesMalvaceaeMalvoideaeGossypium
Proteomesi
  • UP000189702 Componenti: Genome assembly

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei572 – 593HelicalSequence analysisAdd BLAST22

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 26Sequence analysisAdd BLAST26
ChainiPRO_501054922227 – 630Sequence analysisAdd BLAST604

Keywords - PTMi

Disulfide bondSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini519 – 561EGF_CAInterPro annotationAdd BLAST43

Keywords - Domaini

EGF-like domainSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

InterProiView protein in InterPro
IPR001881 EGF-like_Ca-bd_dom
IPR018097 EGF_Ca-bd_CS
IPR003137 PA_domain
PfamiView protein in Pfam
PF02225 PA, 1 hit
SMARTiView protein in SMART
SM00179 EGF_CA, 1 hit
PROSITEiView protein in PROSITE
PS01187 EGF_CA, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1U8JTK9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEIRRLHLLL LLQGFMLLSV MGNCYARFVV EKNSLRLTSP EKIKGTYDSA
60 70 80 90 100
IGNFGIPQYG GSMAGAVVYP KENQKGCKSF DDFGISFKSK PGALPTFVLV
110 120 130 140 150
DRGDCFFALK VWNVQQAGAS AVLVADDIQE ALITMDTPEE DRLAAKYIEN
160 170 180 190 200
ITIPSALIEK KFGETLKKAI SGGDMVNVNL DWRESVPHPD DRVEYELWTN
210 220 230 240 250
SNDECGVKCD MLMEFLKDFK GAAQILEKGG YTQFTPHYIT WYCPQAFSLS
260 270 280 290 300
RQCKSQCINY GRYCAPDPEQ DFSSGYEGKD VVIENLRQLC VFKVANETNK
310 320 330 340 350
PWLWWDYVTD FQIRCPMKEK KYNKECADVV IRALGLDGKK IEKCMGDPNA
360 370 380 390 400
DEDNPVLKEE QEAQVGKGSR GDVTILPTLV VNDRQYRGKL AKGAVLKAIC
410 420 430 440 450
AGFEETTEPA VCLSGDVETN ECLDNNGGCW QDKATNLTAC KDTFRGRVCE
460 470 480 490 500
CPLVDGVQFK GDGYSHCEAS GSGRCKINNG GCWHDARDGH AYSACLDDGN
510 520 530 540 550
GKRQCPPGFK GDGVKNCEDI DECKEKKACQ CPECSCKNTW GSYECTCSGD
560 570 580 590 600
LLYIQDHDTC ISKSSTEVRS SWAAVWVILI GLAMASGGAY LIYKYRLRSY
610 620 630
MDSEIRAIMA QYMPLDSQAE VPNHVSDSRA
Length:630
Mass (Da):69,996
Last modified:May 10, 2017 - v1
Checksum:iF1A51D5A3EF8C2FC
GO

Sequence databases

RefSeqiXP_016691609.1, XM_016836120.1

Genome annotation databases

GeneIDi107908842
KEGGighi:107908842

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_016691609.1, XM_016836120.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi107908842
KEGGighi:107908842

Family and domain databases

InterProiView protein in InterPro
IPR001881 EGF-like_Ca-bd_dom
IPR018097 EGF_Ca-bd_CS
IPR003137 PA_domain
PfamiView protein in Pfam
PF02225 PA, 1 hit
SMARTiView protein in SMART
SM00179 EGF_CA, 1 hit
PROSITEiView protein in PROSITE
PS01187 EGF_CA, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1U8JTK9_GOSHI
AccessioniPrimary (citable) accession number: A0A1U8JTK9
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2017
Last sequence update: May 10, 2017
Last modified: September 27, 2017
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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