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Protein
Submitted name:

leucine-rich repeats and immunoglobulin-like domains protein 1 isoform X3

Gene

LRIG1

Organism
Alligator sinensis (Chinese alligator)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
leucine-rich repeats and immunoglobulin-like domains protein 1 isoform X3Imported
Gene namesi
Name:LRIG1Imported
OrganismiAlligator sinensis (Chinese alligator)Imported
Taxonomic identifieri38654 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaCrocodyliaAlligatoridaeAlligatorinaeAlligator
Proteomesi
  • UP000189705 Componenti: Genome assembly

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei784 – 807HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 28Sequence analysisAdd BLAST28
ChainiPRO_501054685729 – 989Sequence analysisAdd BLAST961

Keywords - PTMi

Disulfide bondSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini486 – 585Ig-likeInterPro annotationAdd BLAST100
Domaini590 – 679Ig-likeInterPro annotationAdd BLAST90
Domaini684 – 770Ig-likeInterPro annotationAdd BLAST87

Keywords - Domaini

Leucine-rich repeatSAAS annotation, RepeatSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

Gene3Di2.60.40.10, 3 hits
3.80.10.10, 2 hits
InterProiView protein in InterPro
IPR000483 Cys-rich_flank_reg_C
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR013098 Ig_I-set
IPR003599 Ig_sub
IPR003598 Ig_sub2
IPR001611 Leu-rich_rpt
IPR003591 Leu-rich_rpt_typical-subtyp
IPR032675 LRR_dom_sf
IPR000372 LRRNT
PfamiView protein in Pfam
PF07679 I-set, 2 hits
PF13855 LRR_8, 5 hits
PF01463 LRRCT, 1 hit
PF01462 LRRNT, 1 hit
SMARTiView protein in SMART
SM00409 IG, 3 hits
SM00408 IGc2, 3 hits
SM00369 LRR_TYP, 14 hits
SM00082 LRRCT, 1 hit
SM00013 LRRNT, 1 hit
SUPFAMiSSF48726 SSF48726, 3 hits
PROSITEiView protein in PROSITE
PS50835 IG_LIKE, 3 hits
PS51450 LRR, 15 hits

Sequencei

Sequence statusi: Complete.

A0A1U8DJ70-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAQPGGASLR ALPAPILILM LSPILSLGAP RCAANCTCSG DLLDCSSRGL
60 70 80 90 100
GALPRGLPAW PASLNLSYNK LTEIDPSAFT ELPNLREVRL NNNELTTIPS
110 120 130 140 150
LGAAPSTVVS LYLHHNRIRS IDASQLKPYV ALETLDLSFN DITEIRSGSF
160 170 180 190 200
PQGLHIKELY LGNNRISALE PGAFDGLSRS LLTLRLSKNR IAQLPVKAFK
210 220 230 240 250
LPRLTQLELN RNRIRLIEGL TFQGLDSLEV LKLQRNNISK LTDGAFWGLA
260 270 280 290 300
KMQVLHLEYN SLTEVNSGSL YGLSSLQQLH LSNNLISRIN PDGWSFCQKL
310 320 330 340 350
HELILSYNNL TRLDEGSLAD LGGLHVLRLS RNSISHIAEG AFKGLRNLRV
360 370 380 390 400
LDLDHNEISG TIEDTNGAFT GLENLSKLTM FGNKIKSVAK KAFSGLEALE
410 420 430 440 450
HLNLGDNAIR SIQADAFARM KNLKQLHINS DSFLCDCQLK WLPQWLAEKE
460 470 480 490 500
LQPFVVATCA HPESLKSQSI FAVQPESFVC DDFPKPQIII QPETTVAVLG
510 520 530 540 550
KDIRFTCLAA SSSSSPMTFA WKKDNEILRN AEIENFAHVR AKDGEVMEYT
560 570 580 590 600
TILHLRHVTF THEGRYQCII TNHFGSTYSS KARLTVNVLP SFIKTPHDIT
610 620 630 640 650
SRTGMTARLE CAAEGHPTPQ IAWQKDGGTD FPAARERRMH VMPDDDVFFI
660 670 680 690 700
TDVKIEDMGV YSCTAQNSAG SVLANATLTV LETPSLVHPL EDHVASVGET
710 720 730 740 750
VALQCKATGS PPPRITWLKG DQPLVVTERH HFTPGNQLLI VRNVILEDAG
760 770 780 790 800
KYTCEMSNTL GTERAHSHVS ILQSLGCRKD RTTVGIITIA VVCSIVLTSL
810 820 830 840 850
VWVCIIYQTR KKSEEYSVTN TDETIVPPDV PSYLSSQGTL SDRQEVVVRV
860 870 880 890 900
DNSQQPNGHI ESNGMCQTDA GRCPDVEAPT VGCRQPKLCI GYNKDTWKPE
910 920 930 940 950
DTAEGTPVPD KTGSSLASAK PSELQSLHSS RAVPAGSSAK QFNGNPEISP
960 970 980
TILDLPSEAQ AKQALLSNGY GPKSRDSIHD FKPSKRSTD
Length:989
Mass (Da):108,430
Last modified:May 10, 2017 - v1
Checksum:iADA14299968DB22A
GO

Sequence databases

RefSeqiXP_014377265.1, XM_014521779.1

Genome annotation databases

GeneIDi102383367

Similar proteinsi

Entry informationi

Entry nameiA0A1U8DJ70_ALLSI
AccessioniPrimary (citable) accession number: A0A1U8DJ70
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2017
Last sequence update: May 10, 2017
Last modified: February 28, 2018
This is version 8 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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