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Protein
Submitted name:

helicase ARIP4 isoform X1

Gene

RAD54L2

Organism
Alligator sinensis (Chinese alligator)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionHelicaseImported, Hydrolase
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
helicase ARIP4 isoform X1Imported
Gene namesi
Name:RAD54L2Imported
OrganismiAlligator sinensis (Chinese alligator)Imported
Taxonomic identifieri38654 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaCrocodyliaAlligatoridaeAlligatorinaeAlligator
Proteomesi
  • UP000189705 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini303 – 523Helicase ATP-bindingInterPro annotationAdd BLAST221
Domaini737 – 904Helicase C-terminalInterPro annotationAdd BLAST168

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili17 – 47Sequence analysisAdd BLAST31
Coiled coili964 – 984Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

KOiK10876

Family and domain databases

CDDicd00079 HELICc, 1 hit
Gene3Di3.40.50.10810, 1 hit
InterProiView protein in InterPro
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
IPR038718 SNF2-like_sf
IPR000330 SNF2_N
PfamiView protein in Pfam
PF00271 Helicase_C, 1 hit
PF00176 SNF2_N, 1 hit
SMARTiView protein in SMART
SM00487 DEXDc, 1 hit
SM00490 HELICc, 1 hit
SUPFAMiSSF52540 SSF52540, 4 hits
PROSITEiView protein in PROSITE
PS51192 HELICASE_ATP_BIND_1, 1 hit
PS51194 HELICASE_CTER, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1U8DFT2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDESISGSD PDLDPDLEQE DMEEEEEEDE EEAMEEEEND GDDEEDLLDE
60 70 80 90 100
NDQPQEAVFS NDHIQHNEDG EWQRSTSTTS SQSKRAERLL QNQHKGLASE
110 120 130 140 150
DTKKKRAQKP SHMRRNIRKL LREDQLESVT KAAQQEELER RKRLEQQRKD
160 170 180 190 200
YPTSIPTVPL EFLSEEIVLR TAEATQLPPQ VLAEEVICLD SSSSGSEDDT
210 220 230 240 250
KGKNSTKDEV IELSSGEDDA LQIVDSSDSA NEGEDDGTEE SSGAHVNDAL
260 270 280 290 300
NQSDALGQVI ININHPPNEE DIFLAPQLAC AVKPHQIGGI RFLYDNLVES
310 320 330 340 350
LERFKTSSGF GCILAHSMGL GKTIQVISFL DVLFRHTEAK TVLAIVPVNT
360 370 380 390 400
LQNWLAEFNM WLPAPETPPA DYNPEEIQPR TFKVHILNDE HKTTAARAKV
410 420 430 440 450
VNDWVTEGGV LLMGYEMYRL LSLKKSFATG RKKKTKKQAG PVIIDLDEED
460 470 480 490 500
RQQELLKGIE KALSRPGPDV VICDEGHRIK NCHASTSQAL KNIRSRRRVV
510 520 530 540 550
LTGYPLQNNL IEYWCMVDFV RPDFLGTRQE FSNMFERPIL NGQCIDSTPQ
560 570 580 590 600
DVRLMRYRSH VLHSLLEGFV QRRGHNVLKI QLPSKEEHVI LVRLSKIQRA
610 620 630 640 650
LYTEFMNRFR DAGNSGWLGL NPLKAFCVCC KIWNHPDVLY EALQKENLAN
660 670 680 690 700
EQDLDVDDLG TASTNSRCQP QGMKIKTESN ASPIGEATNS KFIQSVGFNP
710 720 730 740 750
FQERANQVVT YEWAKDILCD YQTGVLENSP KMVLLFHLVE ESVKLGDKIL
760 770 780 790 800
VFSQSLSTLS VIEEFLAKRQ IPNPAGSDVG VHNWIRNINY YRLDGSTSAS
810 820 830 840 850
ERERLINQFN DPSNSSVWLF LLSTRAGCLG VNLIGANRVV VFDASWNPCH
860 870 880 890 900
DAQAVCRVYR YGQKKPCHIY RLVSDYTLEK KIYDRQISKQ GMSDRVVDDL
910 920 930 940 950
NPVLNFTRRE VENLLHFVEE ESDPARLSVN KNKIKESVLQ LACLKYPHLI
960 970 980 990 1000
TKEPFQHESL LIDRKEHKLT KAEKKAAKKS YEEEKRASVP YTRPSYAQYY
1010 1020 1030 1040 1050
PASDQSLTSI PAFSQRNWRP AHKGEDKPVA SVRPVQSTPI PMMPRHVSMV
1060 1070 1080 1090 1100
GSGSTSGSNP AVNFPINYLQ RAGVLVQKIV TTTDIVIPGT NTSTDVQARI
1110 1120 1130 1140 1150
SAGESIHIIR GTKGTYIRTS DGRIFAIRTT GKPKSNEDHR AAASGSQGPS
1160 1170 1180 1190 1200
LESTSNGRHS ASSPKLPNTE ELTRPISPDS PEIISELQQY AEAAAARESR
1210 1220 1230 1240 1250
HSSPSTNAVQ GHPARTDSLA PLAARGAEQR SGIHCLAPSG SSALPAASQH
1260 1270 1280 1290 1300
VDGHTALDLR GNKRKSTSPS VPEEHARWQQ KKRQLPTAGQ PLGPAPRRPP
1310 1320 1330 1340 1350
RFQPLDHGYP VSGGFTMPPV SLNHNLTHPF VPQAGNSLYM GTGSSYYQLP
1360 1370 1380 1390 1400
NFLSDPHLVF PVTTDPLLTA GTASSSAATS ATASVPPFML NPSVTGMLPN
1410 1420 1430 1440 1450
YSLPFTQSLL PEPRMFAPFP APVLPGGLSR SMASAYPGYM SPQSGYPAGG
1460 1470 1480
LLRSQVPHFE SQEVPEVGCS SNDEDKDDDV IEITGK
Length:1,486
Mass (Da):165,236
Last modified:May 10, 2017 - v1
Checksum:i432102280A79C504
GO

Sequence databases

RefSeqiXP_014379171.1, XM_014523685.1
XP_014379172.1, XM_014523686.1
XP_014379173.1, XM_014523687.1

Genome annotation databases

GeneIDi102378154
KEGGiasn:102378154

Similar proteinsi

Entry informationi

Entry nameiA0A1U8DFT2_ALLSI
AccessioniPrimary (citable) accession number: A0A1U8DFT2
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2017
Last sequence update: May 10, 2017
Last modified: April 25, 2018
This is version 10 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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