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Protein
Submitted name:

protein CBFA2T2 isoform X4

Gene

CBFA2T2

Organism
Alligator sinensis (Chinese alligator)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
protein CBFA2T2 isoform X4Imported
Gene namesi
Name:CBFA2T2Imported
OrganismiAlligator sinensis (Chinese alligator)Imported
Taxonomic identifieri38654 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaCrocodyliaAlligatoridaeAlligatorinaeAlligator
Proteomesi
  • UP000189705 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini101 – 196TAFHInterPro annotationAdd BLAST96
Domaini495 – 531MYND-typeInterPro annotationAdd BLAST37

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili434 – 454Sequence analysisAdd BLAST21
Coiled coili456 – 476Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Family and domain databases

Gene3Di1.20.120.1110, 1 hit
InterProiView protein in InterPro
IPR013289 CBFA2T1/2/3
IPR013291 MTGR1
IPR014896 NHR2
IPR037249 TAFH/NHR1_dom_sf
IPR003894 TAFH_NHR1
IPR002893 Znf_MYND
PANTHERiPTHR10379 PTHR10379, 1 hit
PfamiView protein in Pfam
PF08788 NHR2, 1 hit
PF07531 TAFH, 1 hit
PF01753 zf-MYND, 1 hit
PRINTSiPR01875 ETOFAMILY
PR01877 MTGR1PROTEIN
SMARTiView protein in SMART
SM00549 TAFH, 1 hit
SUPFAMiSSF158553 SSF158553, 1 hit
PROSITEiView protein in PROSITE
PS51119 TAFH, 1 hit
PS01360 ZF_MYND_1, 1 hit
PS50865 ZF_MYND_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1U8DC68-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALISRRLFA NEKRLPVMPG SPVEVKIQSR SSPPSMPPLP PVNPGGPRPV
60 70 80 90 100
SFTPTALPNG INHSPPTLNG APSPPQRFSN APASSSSSSL TNQQLPATCG
110 120 130 140 150
ARQLSKLKRF LTTLQQFGND ISPEIGEKVR TLVLALVNST VTIEEFHCKL
160 170 180 190 200
QEATNFPLRP FVIPFLKANL PLLQRELLHC ARAAKQTPSQ YLAQHEHILL
210 220 230 240 250
NTNTTSPADS SELLIEVNGN GKRHSPDRRE DSSFERDPLP SEPPAKRVCT
260 270 280 290 300
ISPAPRHSPA LTLPLMTSAG QFHPTPPPLQ HYTLEDIATS HLYRDPSKML
310 320 330 340 350
EHRDMRDRHS GLGLNGGYQD ELVDHRLTER EWADEWKHLD HALNCIMEMV
360 370 380 390 400
EKTRRSMAVL RRCQEADREE LNYWKRRYSE TADTRKGGSE LISRQHSPGS
410 420 430 440 450
SDSISSDSLR EFSSRSGTGY VTEEIWKKAE EAVNEVKRQA MSEVQKAVAE
460 470 480 490 500
AEQKAFEMIA SERARMEQTI ADAKRQATED AFLVINEQEE STESCWNCGR
510 520 530 540 550
KASETCSGCN IARYCGSFCQ HKDWERHHRI CGQGLHSQVK PLALPTGRSS
560 570 580
AAAAKAVDGV PSPALEKTSA TTSRSSTPAS VTAVDTNGL
Length:589
Mass (Da):65,160
Last modified:May 10, 2017 - v1
Checksum:i0BC6ABC382B0C783
GO

Sequence databases

RefSeqiXP_014374770.1, XM_014519284.1

Genome annotation databases

GeneIDi102377968

Similar proteinsi

Entry informationi

Entry nameiA0A1U8DC68_ALLSI
AccessioniPrimary (citable) accession number: A0A1U8DC68
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2017
Last sequence update: May 10, 2017
Last modified: April 25, 2018
This is version 12 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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