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Protein
Submitted name:

LOW QUALITY PROTEIN: zinc finger and SCAN domain-containing protein 18

Gene

Zscan18

Organism
Mesocricetus auratus (Golden hamster)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Biological processTranscription, Transcription regulationSAAS annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
LOW QUALITY PROTEIN: zinc finger and SCAN domain-containing protein 18Imported
Gene namesi
Name:Zscan18Imported
OrganismiMesocricetus auratus (Golden hamster)Imported
Taxonomic identifieri10036 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaCricetidaeCricetinaeMesocricetus
Proteomesi
  • UP000189706 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini375 – 453SCAN boxInterPro annotationAdd BLAST79
Domaini753 – 780C2H2-typeInterPro annotationAdd BLAST28

Keywords - Domaini

RepeatSAAS annotation, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Family and domain databases

CDDicd07936 SCAN, 1 hit
Gene3Di1.10.4020.10, 1 hit
InterProiView protein in InterPro
IPR003309 SCAN_dom
IPR038269 SCAN_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF02023 SCAN, 1 hit
SMARTiView protein in SMART
SM00431 SCAN, 1 hit
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS50804 SCAN_BOX, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 1 hit
PS50157 ZINC_FINGER_C2H2_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1U8CNQ8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLPLERALAS PRSSPPHPEP PTFQSQDRFQ KEEPSQQDES IQEEEPIQLL
60 70 80 90 100
EPSLKDEPNQ GEESIQQDNL PNQREELSEQ QEPGQWEGPG QEDVPMQQEE
110 120 130 140 150
PMQQDEPCQW EEPMQQDKPI HQEELIPQEE PIQGEPIQQE KPIQQEEPIQ
160 170 180 190 200
QEEPIQQEEP IQQEKPIQQE ELIQQEELIQ QEEPTQQELI QQEDPIQQDA
210 220 230 240 250
SILQEVIQKE EPIQQDASIQ QELIQPEEPI QEELTLKEDS IQQDKSIQKE
260 270 280 290 300
GFIQQEETIH KDASIHQDAS IQQELIQQEE SIQQDMLIQK VDFIQQEKPV
310 320 330 340 350
QQVGPSPQEK PSQQEEANQQ AEPSQSEEPS QKGLPNQQDE SNQQEEPSPQ
360 370 380 390 400
ETETITERSA ADLTERSAAD LEFSRLRFRE YVYQEAAGPH QTLARLHELC
410 420 430 440 450
RQWLRPEACS KEQILELLVL EQFLGILPDR FRPWVVAQYP ENCKKAASLV
460 470 480 490 500
EGLSDILEEP GTMLCSPGGS SSSFSEGDYK RCPEPLLPPR GLLSPSRNLR
510 520 530 540 550
PRDILVRRDT SPLLPAWPTL ESVHLHEEHT GEKNEEAISA TAEPKEPLQS
560 570 580 590 600
EWEHLDPTED NLTSYGKLLL WGCQCFQAGP SSTLDTEEPE GPRVAEELPG
610 620 630 640 650
GSLSDSTGQR ESKGNVCEDI SMGETLTERL PGDIPVSPSV DTAKEEEIQQ
660 670 680 690 700
PQKALDAEDE DANPASPQRQ SSIRQSAQDT GTPHPGTGTK RPHPDDEDEE
710 720 730 740 750
DPECSSSAGS YKLPFDAGKV LRVDDHDSGK DPGTSDAGCP LAEECDVAQG
760 770 780 790 800
KPYTCGECGE AFAWIWNLME HHKSHNTKTG YVSQDCRNPF QFSLAVGQAQ
810 820 830 840 850
ESHKKKKKNK KKLRPEPLCH KQSSLARGLT AASVFGWFSL YNLRCKDEQL

CCEYLVT
Length:857
Mass (Da):96,879
Last modified:May 10, 2017 - v1
Checksum:i2645B5CAD2E62A6C
GO

Sequence databases

RefSeqiXP_012981166.1, XM_013125712.1

Genome annotation databases

GeneIDi101828248

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_012981166.1, XM_013125712.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi101828248

Organism-specific databases

CTDi65982

Family and domain databases

CDDicd07936 SCAN, 1 hit
Gene3Di1.10.4020.10, 1 hit
InterProiView protein in InterPro
IPR003309 SCAN_dom
IPR038269 SCAN_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF02023 SCAN, 1 hit
SMARTiView protein in SMART
SM00431 SCAN, 1 hit
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS50804 SCAN_BOX, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 1 hit
PS50157 ZINC_FINGER_C2H2_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1U8CNQ8_MESAU
AccessioniPrimary (citable) accession number: A0A1U8CNQ8
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2017
Last sequence update: May 10, 2017
Last modified: November 7, 2018
This is version 12 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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