UniProtKB - A0A1U8CN03 (A0A1U8CN03_MESAU)
Protein
Submitted name:
serine/arginine repetitive matrix protein 2 isoform X1
Gene
Srrm2
Organism
Mesocricetus auratus (Golden hamster)
Status
Names & Taxonomyi
Protein namesi | Submitted name: serine/arginine repetitive matrix protein 2 isoform X1Imported |
Gene namesi | Name:Srrm2Imported |
Organismi | Mesocricetus auratus (Golden hamster)Imported |
Taxonomic identifieri | 10036 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Cricetidae › Cricetinae › Mesocricetus |
Proteomesi |
|
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 559 – 684 | CTDInterPro annotationAdd BLAST | 126 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 141 – 1121 | DisorderedSequence analysisAdd BLAST | 981 | |
Regioni | 1145 – 1259 | DisorderedSequence analysisAdd BLAST | 115 | |
Regioni | 1274 – 2097 | DisorderedSequence analysisAdd BLAST | 824 | |
Regioni | 2268 – 2313 | DisorderedSequence analysisAdd BLAST | 46 | |
Regioni | 2346 – 2706 | DisorderedSequence analysisAdd BLAST | 361 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 209 – 256 | BasicSequence analysisAdd BLAST | 48 | |
Compositional biasi | 264 – 299 | PolarSequence analysisAdd BLAST | 36 | |
Compositional biasi | 309 – 330 | PolarSequence analysisAdd BLAST | 22 | |
Compositional biasi | 331 – 347 | PolyampholyteSequence analysisAdd BLAST | 17 | |
Compositional biasi | 384 – 399 | PolarSequence analysisAdd BLAST | 16 | |
Compositional biasi | 402 – 417 | Pro-richSequence analysisAdd BLAST | 16 | |
Compositional biasi | 418 – 439 | PolarSequence analysisAdd BLAST | 22 | |
Compositional biasi | 459 – 529 | BasicSequence analysisAdd BLAST | 71 | |
Compositional biasi | 542 – 730 | BasicSequence analysisAdd BLAST | 189 | |
Compositional biasi | 769 – 853 | PolarSequence analysisAdd BLAST | 85 | |
Compositional biasi | 854 – 874 | PolyampholyteSequence analysisAdd BLAST | 21 | |
Compositional biasi | 875 – 944 | PolarSequence analysisAdd BLAST | 70 | |
Compositional biasi | 974 – 1084 | PolarSequence analysisAdd BLAST | 111 | |
Compositional biasi | 1103 – 1121 | PolarSequence analysisAdd BLAST | 19 | |
Compositional biasi | 1186 – 1201 | PolarSequence analysisAdd BLAST | 16 | |
Compositional biasi | 1284 – 1304 | PolarSequence analysisAdd BLAST | 21 | |
Compositional biasi | 1322 – 1346 | PolarSequence analysisAdd BLAST | 25 | |
Compositional biasi | 1355 – 1388 | PolarSequence analysisAdd BLAST | 34 | |
Compositional biasi | 1397 – 1518 | PolarSequence analysisAdd BLAST | 122 | |
Compositional biasi | 1534 – 1559 | PolarSequence analysisAdd BLAST | 26 | |
Compositional biasi | 1602 – 1621 | PolarSequence analysisAdd BLAST | 20 | |
Compositional biasi | 1622 – 1663 | PolyampholyteSequence analysisAdd BLAST | 42 | |
Compositional biasi | 1731 – 1745 | BasicSequence analysisAdd BLAST | 15 | |
Compositional biasi | 1760 – 1780 | BasicSequence analysisAdd BLAST | 21 | |
Compositional biasi | 1796 – 1820 | BasicSequence analysisAdd BLAST | 25 | |
Compositional biasi | 1827 – 2021 | BasicSequence analysisAdd BLAST | 195 | |
Compositional biasi | 2031 – 2079 | PolarSequence analysisAdd BLAST | 49 | |
Compositional biasi | 2269 – 2293 | PolarSequence analysisAdd BLAST | 25 | |
Compositional biasi | 2366 – 2400 | PolarSequence analysisAdd BLAST | 35 | |
Compositional biasi | 2408 – 2449 | PolarSequence analysisAdd BLAST | 42 | |
Compositional biasi | 2468 – 2524 | PolarSequence analysisAdd BLAST | 57 | |
Compositional biasi | 2546 – 2560 | PolyampholyteSequence analysisAdd BLAST | 15 | |
Compositional biasi | 2561 – 2608 | PolarSequence analysisAdd BLAST | 48 | |
Compositional biasi | 2623 – 2642 | PolyampholyteSequence analysisAdd BLAST | 20 | |
Compositional biasi | 2643 – 2674 | PolarSequence analysisAdd BLAST | 32 | |
Compositional biasi | 2675 – 2691 | PolyampholyteSequence analysisAdd BLAST | 17 |
Phylogenomic databases
OrthoDBi | 191983at2759 |
Family and domain databases
InterProi | View protein in InterPro IPR013170 mRNA_splic_Cwf21_dom IPR024945 Spt5_C_dom |
Pfami | View protein in Pfam PF08312 cwf21, 1 hit |
SMARTi | View protein in SMART SM01104 CTD, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 4 potential isoforms that are computationally mapped.Show allAlign All
A0A1U8CN03-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MYNGIGLPTP RGSGTNGYVQ RNLSLVRGRR GERPDYKGEE ELRRLEAALV
60 70 80 90 100
KRPNPDILDH ERKRRVELRC LELEEMMEEQ GYEEQQIQEK VATFRLMLLE
110 120 130 140 150
KDVNPGGKEE TPGQRPMVTE THQLAELNEK KNERLRAAFG ISDSYVDGSS
160 170 180 190 200
FDPQRRAREA KQAVPEPPKP YSLVRDTSSS RSPTPKQKKK KKKKDRGRRS
210 220 230 240 250
ESSSPRRERK KSSKKKKHRS ESESKKRKHR SPTPKSKRKS KDKKRKRSRS
260 270 280 290 300
TTPAPKSRRA HRSTSADSAS SSDTSRSRSR SAAAKIHTTA LTGQSPLASG
310 320 330 340 350
HQGEGDAPSS EPGATNIQQP SSPDPSTKQS SSLFEDKDKK EKSAVRPSPS
360 370 380 390 400
PERSSTGPEL PAPTPLLVEQ HDDSPRPLAA IPSSQEPVNP SSEASPTRGC
410 420 430 440 450
SPPKSPEKPP QSSSSESCPP SPQPTKVSRH ASSSPESLKP TPAPGARREI
460 470 480 490 500
SSSPTSKNRS HGRAKRDKSH SHTPSHKAGR SRSPATKRGR SRSRTPTKRG
510 520 530 540 550
HSRSRSPQWR RSRSAQRWGK SRSPQRRGRS RSPQRPGWSR SRNTQRRGRS
560 570 580 590 600
RSARRGRSHS RSPATRGRSR SRTPVRRGRS RSRTPARRRS RSRTPARRRS
610 620 630 640 650
RSRTPTRRGR SRSRTPARRR SRTRSPVRRR SRSRSPARRS GRSHSRTPAR
660 670 680 690 700
RSGRSRSRTP ARRSGRSRSR TPARRSGRSR SRTPARRSGR SRSRTPARRS
710 720 730 740 750
GRSRSRTPAR RRSRSRSLGR RGRSHSRTPQ RRGRSGSSSD RKNKSRTSQR
760 770 780 790 800
RSRSNSSLEM KKSHISSRRS RSLSSPRSKA KSLRRSLSGS SPCPKQKSQT
810 820 830 840 850
PPRRSRSGSS PPKQKSKTSP RLSHSSSSPQ PKVKSGTPPR SGSVTNIHVD
860 870 880 890 900
EHSATPQRQS RSESSPDDEV KSRTPSRQSC SGSSPRVKSS TPLRQSPCRS
910 920 930 940 950
SSPQPKMKTV VSPRRSHSGS SSPSPSRVTS GTPQRQSRSV SPCSKMDSGL
960 970 980 990 1000
LPRRSRSRSS SPDTKVEPGT PLRHSHSGSA SPYPKSMLQT PPEQNFSASK
1010 1020 1030 1040 1050
SPCPQEKSKD SPTESSGSFS LCPGVTLSTL PGESCFGSSF VQQKGQSQIW
1060 1070 1080 1090 1100
PDPRSDTSSP EMRQAQTSPK GGPSRSSSPV TELVLRSPVK QDKCELPTDP
1110 1120 1130 1140 1150
KLQSGLSPEQ SKTKPDSNLY PSIESKSLLL QSRLEPSELK EKLGLIQEDV
1160 1170 1180 1190 1200
TVPSSLPIQD RPESSTVLKD TPRVLLKERS GAGSPPATRD QHSLLPNSSQ
1210 1220 1230 1240 1250
EELMEEKSEQ PLSQVLHSLS PEHKEMPGSN IESSPEIERP AVLSALDQSQ
1260 1270 1280 1290 1300
AQPSSKAAEI PAVASCWGGL QISPEHKELS HSPPGENSFE SSLEFRNSGP
1310 1320 1330 1340 1350
ISEVNAGFSP EVKEELNGPF LNQAETDPSL DMKEQSAMSS RRSSSELSPE
1360 1370 1380 1390 1400
VVEKVGIFSN QSVSSPTLET VHRTPSRERS SSASSPELKD GLPRTPSRRS
1410 1420 1430 1440 1450
RSGSSPGLRD GSGSPSRRSL SGSSPGIKDT PQTPSRGQSE CDSSPESKAL
1460 1470 1480 1490 1500
PQTPRAQSPP SSPELNNKSA TPQRERSGSE SSVEQKTGAR TSPGQRSRSG
1510 1520 1530 1540 1550
SSQEIDGKPS ASPQERSESD SSPDSKPKTR TPLRQRSHSG SSPEVDSKSR
1560 1570 1580 1590 1600
PSPRLSRSGS SPEMKDKPRG LQRAQSGTDS SPEHKIPASR ALPRRSRSGS
1610 1620 1630 1640 1650
SSKDRGPSPE GSSSSESSPE HPPKSRTARR GSRSSMEPKT KSRTPPRRRS
1660 1670 1680 1690 1700
SRSSPELTRK ARASRRSRSA SSSPETRSRT PPRRRRSPSV SSPEPTEKSR
1710 1720 1730 1740 1750
SSRRRRSASS SRTKTTSRRG RSPSPKPRGL QRSRSRSRRE KTRTTRRRDR
1760 1770 1780 1790 1800
SGSSQSTSRR RQRSRSRSRV TRRRRGGSGY HSRSPTRQES SRTSSRRRRG
1810 1820 1830 1840 1850
RSRTPLTSRK RSRSRTSPAP WKRSRSRASP ATHRRSRSRT PLISRRRSRS
1860 1870 1880 1890 1900
RTSPVSRRRS RSVNRRRSRS RASPVSRRRS RSRTPPVTRR RSRSRTPTTR
1910 1920 1930 1940 1950
RRSRSRTPPV TRRRSRSRTP PVTRRRSRSR TSPITRRRSR SRTSPVTRRR
1960 1970 1980 1990 2000
SRSRTSPVTR RRSRSRTSPV TRRRSRSRTP PVIRRRSRSR TPLLPRKRSR
2010 2020 2030 2040 2050
SRSPLAIRRR SRSRTPRATR GKRSITRSPP AIRRRSASGS SSDRSRSATP
2060 2070 2080 2090 2100
PATRNHSGSR TPPVALSSSR MSCFSRPSMS PTPLDRCRSP GMLEPLGSAR
2110 2120 2130 2140 2150
TPMSVLQQTG GSMMDGPGPR IPDHPRTSVP ENHAQSRIAL ALTAISLGTA
2160 2170 2180 2190 2200
RPPPSMSAAG LAARMSQVPA PVPLMSLRTA PAANLASRIP AASAAAMNLA
2210 2220 2230 2240 2250
SARTSAIPAS VNLADSRTPA AAAAMNLASP RTAVAPSAVN LADPRAPAAT
2260 2270 2280 2290 2300
AVNLAGARTP AALAALSLTG SGTPPTAANY PSSSRTPQAP TPANLVGPRS
2310 2320 2330 2340 2350
AHGTAPVNIG GSRTSAALAP SNLSSARMAP ALSGANLTSP RVPLSAYERV
2360 2370 2380 2390 2400
SGRTSPLLLD RARSRTPPSA PSQSRMTSER APSPASRMVQ APSQSLLPPA
2410 2420 2430 2440 2450
QDRPRSPVPS AFSDQSRSIA QTTPVAGSQS LSSGTVAKST SSASDHNGML
2460 2470 2480 2490 2500
SGPTPGAPHA EGGEPPASTG AQQPSALAAL QPTKERRSSS SSSSSSSSSS
2510 2520 2530 2540 2550
SSSSSSSSSS SSGSSSSDSE GSSLPAQPEV ALKRVPSPTP APKEAVREGR
2560 2570 2580 2590 2600
PQEPTPAKRK RRSSSSSSSS SSSSSSSSSS SSSSSSSSSS SSSSSSSSSS
2610 2620 2630 2640 2650
SSSSPSPAKP GPQALPKPAS PKKPPPGERR SRSPRKPIDS LRDSRSLSYS
2660 2670 2680 2690 2700
PVERHQPSPQ PSPRDQQSSE RVSWRGQRGD SRSPGHKRRK ETPSPRPNRH
RSSRSP
Computationally mapped potential isoform sequencesi
There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketA0A1U8CCF8 | A0A1U8CCF8_MESAU | serine/arginine repetitive matrix p... | Srrm2 | 2,537 | Annotation score: | ||
A0A1U8CFA8 | A0A1U8CFA8_MESAU | serine/arginine repetitive matrix p... | Srrm2 | 2,688 | Annotation score: | ||
A0A1U8CN09 | A0A1U8CN09_MESAU | serine/arginine repetitive matrix p... | Srrm2 | 291 | Annotation score: | ||
A0A3Q0D9Z3 | A0A3Q0D9Z3_MESAU | serine/arginine repetitive matrix p... | Srrm2 | 88 | Annotation score: |
Sequence databases
RefSeqi | XP_012977128.1, XM_013121674.1 |
Genome annotation databases
GeneIDi | 101840039 |
Similar proteinsi
Cross-referencesi
Sequence databases
RefSeqi | XP_012977128.1, XM_013121674.1 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Genome annotation databases
GeneIDi | 101840039 |
Organism-specific databases
CTDi | 23524 |
Phylogenomic databases
OrthoDBi | 191983at2759 |
Family and domain databases
InterProi | View protein in InterPro IPR013170 mRNA_splic_Cwf21_dom IPR024945 Spt5_C_dom |
Pfami | View protein in Pfam PF08312 cwf21, 1 hit |
SMARTi | View protein in SMART SM01104 CTD, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | A0A1U8CN03_MESAU | |
Accessioni | A0A1U8CN03Primary (citable) accession number: A0A1U8CN03 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | May 10, 2017 |
Last sequence update: | May 10, 2017 | |
Last modified: | July 31, 2019 | |
This is version 9 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |