Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

leucine-rich repeat flightless-interacting protein 1 isoform X5

Gene

Lrrfip1

Organism
Mesocricetus auratus (Golden hamster)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
leucine-rich repeat flightless-interacting protein 1 isoform X5Imported
Gene namesi
Name:Lrrfip1Imported
OrganismiMesocricetus auratus (Golden hamster)Imported
Taxonomic identifieri10036 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaCricetidaeCricetinaeMesocricetus
Proteomesi
  • UP000189706 Componenti: Genome assembly

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili16 – 65Sequence analysisAdd BLAST50
Coiled coili104 – 138Sequence analysisAdd BLAST35
Coiled coili146 – 180Sequence analysisAdd BLAST35
Coiled coili184 – 225Sequence analysisAdd BLAST42
Coiled coili236 – 263Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

InterProiView protein in InterPro
IPR019139 LRRFIP1/2
PANTHERiPTHR19212 PTHR19212, 2 hits
PfamiView protein in Pfam
PF09738 LRRFIP, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 10 potential isoforms that are computationally mapped.Show allAlign All

A0A1U8CDR4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDMGTQGSGR KRLPNRERLT AEDDALNQIA REAEARLAAK RAARAEAREI
60 70 80 90 100
RMKELERQQK EVEERPDKDF TEKGSRNMPS LSAATLASLG GTSSRRGSGD
110 120 130 140 150
TSISMDTEAS IREIKDSLAE VEEKYKKAMV SNAQLDNEKT NFMYQVDTLK
160 170 180 190 200
DMLLELEEQL AESQRQYEEK NKEFEREKHA HSILQFQFAE VKEALRQREE
210 220 230 240 250
MLEEIRQLQQ KQAGFVREIS DLQETIEWKD KKIGALERQK EFFDSIRSER
260 270 280 290 300
DDLREETVKL KEELKKHGII LNSEIATNGE TSDTLNGVGY QGPTKMTKEE
310 320 330 340 350
LNALKSAGEG TLGKAKEVEL KKEIVENMGK GGGTLQNTEQ EQPRPNPVKD
360 370 380 390 400
CVDKGMSHPG DNAEDQKPAE DSALSPGPLA GAKCEQQVQS QAQENSFLKD
410 420 430 440 450
PEQIESCEVT DQPDGRTRNS LEQSNCLQGL DSEESEPKNP SENSVGLGQT
460 470 480 490 500
SEVDKMSFTD SRGAGGNHTE NAGQVEGAAV GEEVGTVASS PSEHHEDTLS
510 520 530 540 550
HERSVDDGEE QSLERELTQE VAEPEEVLVP SPPVTGENTV GKTRDKKSIL
560 570 580 590 600
AEVHATHAPL DEKEPDKEKS EQQAEALDSP QKKSKNRKKK NKKKKSPASA
610 620 630 640 650
ETCQDASKEV DRQSVEEEPA QFPDKKQAAE TQSEDTENSE QKITAGSSEH
660 670 680 690 700
AECLQDPENE LNGKQKQGEE DGVKTQAGKV TAKGDVLMHE AEAAQSVGTS
710 720 730 740 750
AGGEEVEDHD ADGPTDVSDQ NKEGEISPVK KKGPPKDANH ASQRGSEEEH
760 770 780 790 800
VLSHHPGQTV KKAVDGCSVD NSDLSGQLEG FSSESGVQAR GEVENSKSKE

DCTMS
Length:805
Mass (Da):88,495
Last modified:May 10, 2017 - v1
Checksum:iB620904CBD486351
GO

Computationally mapped potential isoform sequencesi

There are 10 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1U7QW43A0A1U7QW43_MESAU
leucine-rich repeat flightless-inte...
Lrrfip1
403Annotation score:
A0A1U8CQ71A0A1U8CQ71_MESAU
leucine-rich repeat flightless-inte...
Lrrfip1
733Annotation score:
A0A1U8CGH4A0A1U8CGH4_MESAU
leucine-rich repeat flightless-inte...
Lrrfip1
843Annotation score:
A0A1U8CDT7A0A1U8CDT7_MESAU
leucine-rich repeat flightless-inte...
Lrrfip1
831Annotation score:
A0A1U8CDR9A0A1U8CDR9_MESAU
leucine-rich repeat flightless-inte...
Lrrfip1
604Annotation score:
A0A1U8CP89A0A1U8CP89_MESAU
leucine-rich repeat flightless-inte...
Lrrfip1
743Annotation score:
A0A1U8CP85A0A1U8CP85_MESAU
leucine-rich repeat flightless-inte...
Lrrfip1
905Annotation score:
A0A1U8CGH8A0A1U8CGH8_MESAU
leucine-rich repeat flightless-inte...
Lrrfip1
565Annotation score:
A0A1U8CDU2A0A1U8CDU2_MESAU
leucine-rich repeat flightless-inte...
Lrrfip1
503Annotation score:
A0A1U8CQ66A0A1U8CQ66_MESAU
leucine-rich repeat flightless-inte...
Lrrfip1
885Annotation score:

Sequence databases

RefSeqiXP_012977572.1, XM_013122118.1

Genome annotation databases

GeneIDi101837629

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_012977572.1, XM_013122118.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi101837629

Organism-specific databases

CTDi9208

Family and domain databases

InterProiView protein in InterPro
IPR019139 LRRFIP1/2
PANTHERiPTHR19212 PTHR19212, 2 hits
PfamiView protein in Pfam
PF09738 LRRFIP, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1U8CDR4_MESAU
AccessioniPrimary (citable) accession number: A0A1U8CDR4
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2017
Last sequence update: May 10, 2017
Last modified: October 25, 2017
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again