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Protein
Submitted name:

tumor necrosis factor receptor superfamily member 16

Gene

Ngfr

Organism
Mesocricetus auratus (Golden hamster)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

GO - Biological processi

Keywordsi

Molecular functionReceptorImported

Names & Taxonomyi

Protein namesi
Submitted name:
tumor necrosis factor receptor superfamily member 16Imported
Gene namesi
Name:NgfrImported
OrganismiMesocricetus auratus (Golden hamster)Imported
Taxonomic identifieri10036 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaCricetidaeCricetinaeMesocricetus
Proteomesi
  • UP000189706 Componenti: Genome assembly

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei254 – 274HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 29Sequence analysisAdd BLAST29
ChainiPRO_501055371430 – 429Sequence analysisAdd BLAST400

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi46 ↔ 59PROSITE-ProRule annotation
Disulfide bondi88 ↔ 101PROSITE-ProRule annotation
Disulfide bondi91 ↔ 109PROSITE-ProRule annotation
Disulfide bondi127 ↔ 140PROSITE-ProRule annotation
Disulfide bondi130 ↔ 148PROSITE-ProRule annotation
Disulfide bondi151 ↔ 166PROSITE-ProRule annotation
Disulfide bondi169 ↔ 182PROSITE-ProRule annotation
Disulfide bondi172 ↔ 190PROSITE-ProRule annotation

Keywords - PTMi

Disulfide bondPROSITE-ProRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini33 – 66TNFR-CysInterPro annotationAdd BLAST34
Repeati33 – 66TNFR-CysPROSITE-ProRule annotationAdd BLAST34
Domaini68 – 109TNFR-CysInterPro annotationAdd BLAST42
Repeati68 – 109TNFR-CysPROSITE-ProRule annotationAdd BLAST42
Domaini110 – 148TNFR-CysInterPro annotationAdd BLAST39
Repeati110 – 148TNFR-CysPROSITE-ProRule annotationAdd BLAST39
Domaini150 – 190TNFR-CysInterPro annotationAdd BLAST41
Repeati150 – 190TNFR-CysPROSITE-ProRule annotationAdd BLAST41
Domaini346 – 423DeathInterPro annotationAdd BLAST78

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

CDDicd13416 TNFRSF16, 1 hit
InterProiView protein in InterPro
IPR011029 DEATH-like_dom_sf
IPR000488 Death_domain
IPR001368 TNFR/NGFR_Cys_rich_reg
IPR022325 TNFR_16
IPR034046 TNFRSF16_N
PfamiView protein in Pfam
PF00531 Death, 1 hit
PF00020 TNFR_c6, 2 hits
PRINTSiPR01966 TNFACTORR16
SMARTiView protein in SMART
SM00005 DEATH, 1 hit
SM00208 TNFR, 4 hits
SUPFAMiSSF47986 SSF47986, 1 hit
PROSITEiView protein in PROSITE
PS50017 DEATH_DOMAIN, 1 hit
PS00652 TNFR_NGFR_1, 2 hits
PS50050 TNFR_NGFR_2, 4 hits

Sequencei

Sequence statusi: Complete.

A0A1U8C3S2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRAGAACSAM DQSRLLLLLL LLGVSRCQGA KETCSTGLYT HSGECCKACN
60 70 80 90 100
LGEGVAQPCG ANQTVCEPCL DSVTFSDVVS ATEPCKPCTE CLGLQSMSAP
110 120 130 140 150
CVEADDAVCR CAYGYYQDEE TGRCEACSVC EVGSGLVFSC QDKQNTVCEE
160 170 180 190 200
CPEGTYSDEA NHVDPCLPCT VCEDTERQLR ECTPWADAEC EEIPGRWITR
210 220 230 240 250
STPPEGSDST APSTQEPEAP PDQDLIASTV ADTVTTVMGS SQPVVTRGTT
260 270 280 290 300
DNLIPVYCSI LAAVVVGLVA YIAFKRWNSC KQNKQGANSR PVNQTPPPEG
310 320 330 340 350
EKLHSDSGIS VDSQSLHDQQ THTQTASGQA LKGDGGLYSS LPLTKREEVE
360 370 380 390 400
KLLKGSAGDT WRHLAGELGY QPEHIDSFTH ETCPVGALMA SWGAQDSATF
410 420
DALLAALRRI QRADIVESLC SESTATSPV
Length:429
Mass (Da):45,646
Last modified:May 10, 2017 - v1
Checksum:i199C6363C3285F2D
GO

Sequence databases

RefSeqiXP_012973055.1, XM_013117601.1

Genome annotation databases

GeneIDi101825585

Similar proteinsi

Entry informationi

Entry nameiA0A1U8C3S2_MESAU
AccessioniPrimary (citable) accession number: A0A1U8C3S2
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2017
Last sequence update: May 10, 2017
Last modified: November 22, 2017
This is version 6 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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