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Protein
Submitted name:

leucine-rich repeats and immunoglobulin-like domains protein 1

Gene

Lrig1

Organism
Mesocricetus auratus (Golden hamster)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
leucine-rich repeats and immunoglobulin-like domains protein 1Imported
Gene namesi
Name:Lrig1Imported
OrganismiMesocricetus auratus (Golden hamster)Imported
Taxonomic identifieri10036 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaCricetidaeCricetinaeMesocricetus
Proteomesi
  • UP000189706 Componenti: Genome assembly

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei795 – 818HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 34Sequence analysisAdd BLAST34
ChainiPRO_501052235135 – 1089Sequence analysisAdd BLAST1055

Keywords - PTMi

Disulfide bondSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini497 – 596Ig-likeInterPro annotationAdd BLAST100
Domaini601 – 690Ig-likeInterPro annotationAdd BLAST90
Domaini695 – 781Ig-likeInterPro annotationAdd BLAST87

Keywords - Domaini

Leucine-rich repeatSAAS annotation, RepeatSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

Gene3Di2.60.40.10, 3 hits
3.80.10.10, 2 hits
InterProiView protein in InterPro
IPR000483 Cys-rich_flank_reg_C
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR013098 Ig_I-set
IPR003599 Ig_sub
IPR003598 Ig_sub2
IPR001611 Leu-rich_rpt
IPR003591 Leu-rich_rpt_typical-subtyp
IPR032675 LRR_dom_sf
IPR000372 LRRNT
PfamiView protein in Pfam
PF07679 I-set, 2 hits
PF13855 LRR_8, 5 hits
PF01463 LRRCT, 1 hit
PF01462 LRRNT, 1 hit
SMARTiView protein in SMART
SM00409 IG, 3 hits
SM00408 IGc2, 3 hits
SM00369 LRR_TYP, 14 hits
SM00082 LRRCT, 1 hit
SM00013 LRRNT, 1 hit
SUPFAMiSSF48726 SSF48726, 3 hits
PROSITEiView protein in PROSITE
PS50835 IG_LIKE, 3 hits
PS51450 LRR, 14 hits

Sequencei

Sequence statusi: Complete.

A0A1U8C224-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARPGPGVLG APRLAPRLLL WLLLLLLQWS ESAGAQAGSR EPCAAACTCA
60 70 80 90 100
GDSVDCSGRG LATLPRDLPS WTRSLNLSYN KLSEIDSDGF EDLTNLQEVY
110 120 130 140 150
LNNNELTAIP SLGAASTHVV SLFLQHNRIL SVDGHQLKSY LSLEVLDLSL
160 170 180 190 200
NNITEIRSSC FPNGLRVREL NLASNRISSL ESGAFDGLSR SLLTLRLSKN
210 220 230 240 250
RITQLPVKAF KLPRLTQLDL NRNRIRLIEG LTFQGLDSLE VLKLQRNNIS
260 270 280 290 300
KLTDGAFWGL SKMHVLHLEY NSLVEVNSGS LYGLTGLHQL HLSNNSISRI
310 320 330 340 350
QRDGWSFCQK LHELILSFNN LTRLDEESLA ELSNLSILRL SHNAISHIAE
360 370 380 390 400
GAFKGLKNLR VLDLDHNEIS GTIEDTSGAF MGLDNLSKLT LFGNKIKSVA
410 420 430 440 450
KRAFSGLEGL EHLNLGENAI RSVQFDAFAK MKNLKELHIS SESFLCDCQL
460 470 480 490 500
KWLPPWLMDR MLQTFVTATC AHPESLKGQS IFSVLPDSFV CDDFPKPQII
510 520 530 540 550
TQPETTMAVV GKDIRFTCSA ASSSSSPMTF AWKKDNEVLA NADMENFAHV
560 570 580 590 600
RAQDGEVMEY TTILHLRHVT FGHEGRYQCV ITNHFGSTYS HKARLTVNVL
610 620 630 640 650
PSFTKIPYDI AIRTGTTARL ECAATGHPNP QIAWQKDGGT DFPAARERRM
660 670 680 690 700
HVMPDDDVFF ITDVKIDDMG VYSCTAQNSA GSVSANATLT VLETPSLAVP
710 720 730 740 750
LEDRVVTVGE TVALQCKAMG SPTPRITWLK GGRPLSLTER HHFTPGNQLL
760 770 780 790 800
VVQNVVAEDA GRYTCEMSNP LGTERAHSQL SILPTPGCRK DGTTIGIFTI
810 820 830 840 850
AVVCSIVLTS LVWVCIIYQT RKKTEEYSVT NTDETIVPPD VPSYLSSQGT
860 870 880 890 900
LSDRQETVVR TEGGHQASGH IESNGVCLRD SSLFPEVDMH SITCRQPKLC
910 920 930 940 950
VGYTREPWKV MEKADRTTAP YTTAHGGSAV CGDCNTDMDS QPKEQASSGQ
960 970 980 990 1000
PETPSSQELR QHNQDYSPNH PYTGTADGIH THSGGSLYPS NHDRILLSLK
1010 1020 1030 1040 1050
NKAASPDGKD SSWTLAKLHE PDSIDLQPSP TLTSGSPELP EDAIPTEAQH
1060 1070 1080
LLVSNGHLPQ DCDSSPESMP LTGQLTGKRR GPLLLAPKS
Length:1,089
Mass (Da):119,381
Last modified:May 10, 2017 - v1
Checksum:iCEDDD656EC841852
GO

Sequence databases

RefSeqiXP_012969639.1, XM_013114185.1

Genome annotation databases

EnsembliENSMAUT00000009077; ENSMAUP00000005449; ENSMAUG00000007470
GeneIDi101843043

Similar proteinsi

Entry informationi

Entry nameiA0A1U8C224_MESAU
AccessioniPrimary (citable) accession number: A0A1U8C224
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2017
Last sequence update: May 10, 2017
Last modified: June 20, 2018
This is version 10 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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