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Protein
Submitted name:

DNA-binding protein RFXANK isoform X1

Gene

RFXANK

Organism
Tarsius syrichta (Philippine tarsier)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionDNA-bindingImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA-binding protein RFXANK isoform X1Imported
Gene namesi
Name:RFXANKImported
OrganismiTarsius syrichta (Philippine tarsier)Imported
Taxonomic identifieri1868482 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniTarsiiformesTarsiidaeCarlito
Proteomesi
  • UP000189704 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini109 – 262ANK_REP_REGIONInterPro annotationAdd BLAST154
Repeati143 – 175ANKPROSITE-ProRule annotationAdd BLAST33
Repeati176 – 208ANKPROSITE-ProRule annotationAdd BLAST33
Repeati209 – 241ANKPROSITE-ProRule annotationAdd BLAST33

Keywords - Domaini

ANK repeatPROSITE-ProRule annotation

Family and domain databases

CDDicd00204 ANK, 1 hit
Gene3Di1.25.40.20, 1 hit
InterProiView protein in InterPro
IPR002110 Ankyrin_rpt
IPR020683 Ankyrin_rpt-contain_dom
IPR036770 Ankyrin_rpt-contain_sf
IPR017362 DNA-bd_RFXANK
PfamiView protein in Pfam
PF12796 Ank_2, 1 hit
PF13606 Ank_3, 1 hit
PIRSFiPIRSF038034 DNA-binding_RFXANK, 1 hit
SMARTiView protein in SMART
SM00248 ANK, 4 hits
SUPFAMiSSF48403 SSF48403, 1 hit
PROSITEiView protein in PROSITE
PS50297 ANK_REP_REGION, 1 hit
PS50088 ANK_REPEAT, 3 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

A0A1U7V554-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MIVVDHYCHL FDSGASPASP MEPTQPAEDF ILTQQPPASE LGVLDDPGEE
60 70 80 90 100
APDGSDTVVL SLFPCTPEPG NPEPDASVSS PQAGSSLKHS TTLTNRQRGN
110 120 130 140 150
EVSALPATLD SLSIHQLAAQ GELSQLKEHL RRGDNLINKP DERGFTPLIW
160 170 180 190 200
ASAFGEIETV RFLLEWGADP HILAKERESA LSLASTGGYT DIVGLLLEHD
210 220 230 240 250
VDINIYDWNG GTPLLYAVRG NHVKCVEALL ARGADLTTEA DSGYTPMDLA
260 270 280
VALGYRKVQQ VIENHILKLF QSNLVPTDPE
Length:280
Mass (Da):30,225
Last modified:May 10, 2017 - v1
Checksum:iAE35B4F41A20B2A1
GO

Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1U7UKT1A0A1U7UKT1_TARSY
DNA-binding protein RFXANK isoform ...
RFXANK
260Annotation score:
A0A1U7UVP8A0A1U7UVP8_TARSY
DNA-binding protein RFXANK isoform ...
RFXANK
279Annotation score:
A0A1U7URK3A0A1U7URK3_TARSY
DNA-binding protein RFXANK isoform ...
RFXANK
259Annotation score:

Sequence databases

RefSeqiXP_008072852.1, XM_008074661.1

Genome annotation databases

GeneIDi103277262

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_008072852.1, XM_008074661.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi103277262

Organism-specific databases

CTDi8625

Family and domain databases

CDDicd00204 ANK, 1 hit
Gene3Di1.25.40.20, 1 hit
InterProiView protein in InterPro
IPR002110 Ankyrin_rpt
IPR020683 Ankyrin_rpt-contain_dom
IPR036770 Ankyrin_rpt-contain_sf
IPR017362 DNA-bd_RFXANK
PfamiView protein in Pfam
PF12796 Ank_2, 1 hit
PF13606 Ank_3, 1 hit
PIRSFiPIRSF038034 DNA-binding_RFXANK, 1 hit
SMARTiView protein in SMART
SM00248 ANK, 4 hits
SUPFAMiSSF48403 SSF48403, 1 hit
PROSITEiView protein in PROSITE
PS50297 ANK_REP_REGION, 1 hit
PS50088 ANK_REPEAT, 3 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1U7V554_TARSY
AccessioniPrimary (citable) accession number: A0A1U7V554
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2017
Last sequence update: May 10, 2017
Last modified: February 28, 2018
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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