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Protein
Submitted name:

RNA-binding protein 45

Gene

RBM45

Organism
Tarsius syrichta (Philippine tarsier)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
RNA-binding protein 45Imported
Gene namesi
Name:RBM45Imported
OrganismiTarsius syrichta (Philippine tarsier)Imported
Taxonomic identifieri1868482 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniTarsiiformesTarsiidaeCarlito
Proteomesi
  • UP000189704 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini26 – 106RRMInterPro annotationAdd BLAST81
Domaini121 – 195RRMInterPro annotationAdd BLAST75
Domaini390 – 462RRMInterPro annotationAdd BLAST73

Phylogenomic databases

OMAiGEIQDIW

Family and domain databases

CDDicd12366 RRM1_RBM45, 1 hit
cd12367 RRM2_RBM45, 1 hit
cd12368 RRM3_RBM45, 1 hit
cd12369 RRM4_RBM45, 1 hit
Gene3Di3.30.70.330, 4 hits
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR034203 RBM45_RRM1
IPR034206 RBM45_RRM2
IPR034207 RBM45_RRM3
IPR034208 RBM45_RRM4
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 4 hits
SMARTiView protein in SMART
SM00360 RRM, 4 hits
SUPFAMiSSF54928 SSF54928, 2 hits
PROSITEiView protein in PROSITE
PS50102 RRM, 3 hits

Sequencei

Sequence statusi: Complete.

A0A1U7TAY5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDEAGSSASG GGFRPGVDSL DEPPNSRIFL VISKYTPESV LRERFSPFGE
60 70 80 90 100
IQDIWVVRDK HTKESKGIAF VKFARSSQAC RAMEEMHGQC LGPNDTKPIK
110 120 130 140 150
VFIAQSRSSG SHRDVEDEEL TRIFVMIPKS YTEEDLREKF KVYGDIEYCS
160 170 180 190 200
IIKNKVTGES KGLGYVRYLK PSQAAQAIEN CDRSFRAILA EPKNKASESS
210 220 230 240 250
EQDYYSNMRQ EALGHEPRVN MFPFEQQSEF SSFDKNDNRG QEAISKRLSV
260 270 280 290 300
VSRVPFTEEQ LFSIFDIVPG LEYCEVQRDP YSNYGHGVVQ YFNVASAIYA
310 320 330 340 350
KYKLHGFQYP PGNRIGVSFI DDGSNATDLL RKMATQMVAA QLASMVWNNP
360 370 380 390 400
SQQQFMQFGG SSGSQLPQIQ TDVVLPSCKK KAPPETPVKE RLFIVFNPHP
410 420 430 440 450
LPLDVLEDIF CRFGNLIEVY LVSGKNVGYA KYADRMSAND AIATLHGKIL
460 470
NGVRLKVMLA DSPREESNKR QRTY
Length:474
Mass (Da):53,431
Last modified:May 10, 2017 - v1
Checksum:i81212A808CC85E06
GO

Sequence databases

RefSeqiXP_008050951.1, XM_008052760.1

Genome annotation databases

GeneIDi103254765

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_008050951.1, XM_008052760.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi103254765

Organism-specific databases

CTDi129831

Phylogenomic databases

OMAiGEIQDIW

Family and domain databases

CDDicd12366 RRM1_RBM45, 1 hit
cd12367 RRM2_RBM45, 1 hit
cd12368 RRM3_RBM45, 1 hit
cd12369 RRM4_RBM45, 1 hit
Gene3Di3.30.70.330, 4 hits
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR034203 RBM45_RRM1
IPR034206 RBM45_RRM2
IPR034207 RBM45_RRM3
IPR034208 RBM45_RRM4
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 4 hits
SMARTiView protein in SMART
SM00360 RRM, 4 hits
SUPFAMiSSF54928 SSF54928, 2 hits
PROSITEiView protein in PROSITE
PS50102 RRM, 3 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1U7TAY5_TARSY
AccessioniPrimary (citable) accession number: A0A1U7TAY5
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2017
Last sequence update: May 10, 2017
Last modified: November 7, 2018
This is version 10 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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