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Protein
Submitted name:

rho GTPase-activating protein 42

Gene

ARHGAP42

Organism
Alligator sinensis (Chinese alligator)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGTPase activationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
rho GTPase-activating protein 42Imported
Gene namesi
Name:ARHGAP42Imported
OrganismiAlligator sinensis (Chinese alligator)Imported
Taxonomic identifieri38654 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaCrocodyliaAlligatoridaeAlligatorinaeAlligator
Proteomesi
  • UP000189705 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini265 – 374PHInterPro annotationAdd BLAST110
Domaini376 – 572Rho-GAPInterPro annotationAdd BLAST197
Domaini816 – 874SH3InterPro annotationAdd BLAST59

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili87 – 107Sequence analysisAdd BLAST21
Coiled coili225 – 259Sequence analysisAdd BLAST35

Keywords - Domaini

Coiled coilSequence analysis, SH3 domainPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

KOiK20651

Family and domain databases

Gene3Di1.10.555.10, 1 hit
1.20.1270.60, 1 hit
2.30.29.30, 1 hit
InterProiView protein in InterPro
IPR027267 AH/BAR_dom_sf
IPR011993 PH-like_dom_sf
IPR001849 PH_domain
IPR008936 Rho_GTPase_activation_prot
IPR000198 RhoGAP_dom
IPR036028 SH3-like_dom_sf
IPR001452 SH3_domain
PfamiView protein in Pfam
PF00169 PH, 1 hit
PF00620 RhoGAP, 1 hit
PF14604 SH3_9, 1 hit
SMARTiView protein in SMART
SM00233 PH, 1 hit
SM00324 RhoGAP, 1 hit
SM00326 SH3, 1 hit
SUPFAMiSSF103657 SSF103657, 1 hit
SSF48350 SSF48350, 1 hit
SSF50044 SSF50044, 1 hit
PROSITEiView protein in PROSITE
PS50003 PH_DOMAIN, 1 hit
PS50238 RHOGAP, 1 hit
PS50002 SH3, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1U7S9S6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGLPTLEFSD SYLDSPDFRD RLKCHEIELE RTNKFIKELI KDGSLLIGAL
60 70 80 90 100
RNLSMAVQKF SQSLQDFQFE CIGDAETDDE ISIAQSLKEF ARLLIAVEEE
110 120 130 140 150
RRRLIQNAND VLIAPLEKFR KEQIGAAKDG KKKFDKESEK YYSILEKHLN
160 170 180 190 200
LSAKKKESHL QDADTQIDRE HQNFYEASLE YVFKIQEVQE KKKFEFVEPL
210 220 230 240 250
LSFLQGLFTF YHEGYELAQE FAPYKQQLQF NLQNTRNNFE STRQEVERLM
260 270 280 290 300
QRMKSASQDY RPPSQWTMEG YLYVQEKRPL GFTWIKHYCT YDKGTKTFTM
310 320 330 340 350
SLAETKSGGK VNGLVTSSPE ILKLKSCIRR KTDSIDKRFC FDIEVFERPG
360 370 380 390 400
IITLQASSES NRKLWLEAMD GKEPIYTLPA IISKKEEMFL NEAGFNFVRK
410 420 430 440 450
CIHAVETRGI TILGLYRIGG VNSKVQKLMN TIFSPKSPPD MDIDMELWDN
460 470 480 490 500
KTITSGLKNY LRCLTEPLMT FKLHKDFILA VKSDDQNYRV EAVHALVHKL
510 520 530 540 550
PEKNREMLDI LIKHLVKVSL HSQQNLMTVS NLGVIFGPTL MRAQEETVAA
560 570 580 590 600
MMNIKFQNIV VEILIEHYEK IFHTAPDPNI PLPQPQSRSG SRRSRAICLS
610 620 630 640 650
TGTRKPKGRY TPCLADPDSD SYSSSPDSTP MGSIESLSSH SSEQNSTTKS
660 670 680 690 700
ASSQPREKSG GIPWIASPPS SNGQKSSGLW TTSPESSSKE DATKTDVESD
710 720 730 740 750
CQSVASVTGP ENMSPPIDLT KKGPYGLTGL KRSAASSLRS IPSAEGNKSF
760 770 780 790 800
SGSVQSLSSI DAKDTPKAPP NPELPPKMCR RLRLDTASSN GYQRPGSVVA
810 820 830 840 850
ARAQMFESAS SLKQASSGRQ AKAMYSCKAE HSHELSFPQG AIFSNVYPSV
860 870
EPGWLKATYE GKTGLVPENY VVFL
Length:874
Mass (Da):98,445
Last modified:May 10, 2017 - v1
Checksum:i1E1380330AD51912
GO

Sequence databases

RefSeqiXP_006028054.1, XM_006027992.1

Genome annotation databases

GeneIDi102372313
KEGGiasn:102372313

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_006028054.1, XM_006027992.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi102372313
KEGGiasn:102372313

Organism-specific databases

CTDi143872

Phylogenomic databases

KOiK20651

Family and domain databases

Gene3Di1.10.555.10, 1 hit
1.20.1270.60, 1 hit
2.30.29.30, 1 hit
InterProiView protein in InterPro
IPR027267 AH/BAR_dom_sf
IPR011993 PH-like_dom_sf
IPR001849 PH_domain
IPR008936 Rho_GTPase_activation_prot
IPR000198 RhoGAP_dom
IPR036028 SH3-like_dom_sf
IPR001452 SH3_domain
PfamiView protein in Pfam
PF00169 PH, 1 hit
PF00620 RhoGAP, 1 hit
PF14604 SH3_9, 1 hit
SMARTiView protein in SMART
SM00233 PH, 1 hit
SM00324 RhoGAP, 1 hit
SM00326 SH3, 1 hit
SUPFAMiSSF103657 SSF103657, 1 hit
SSF48350 SSF48350, 1 hit
SSF50044 SSF50044, 1 hit
PROSITEiView protein in PROSITE
PS50003 PH_DOMAIN, 1 hit
PS50238 RHOGAP, 1 hit
PS50002 SH3, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1U7S9S6_ALLSI
AccessioniPrimary (citable) accession number: A0A1U7S9S6
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2017
Last sequence update: May 10, 2017
Last modified: March 28, 2018
This is version 9 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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