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Protein

Phosphodiesterase

Gene

PDE8B

Organism
Alligator sinensis (Chinese alligator)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Cofactori

a divalent metal cationUniRule annotationNote: Binds 2 divalent metal cations per subunit. Site 1 may preferentially bind zinc ions, while site 2 has a preference for magnesium and/or manganese ions.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionHydrolaseUniRule annotationSAAS annotation
LigandMetal-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
PhosphodiesteraseUniRule annotation (EC:3.1.4.-UniRule annotation)
Gene namesi
Name:PDE8BImported
OrganismiAlligator sinensis (Chinese alligator)Imported
Taxonomic identifieri38654 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaCrocodyliaAlligatoridaeAlligatorinaeAlligator
Proteomesi
  • UP000189705 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini152 – 216PASInterPro annotationAdd BLAST65
Domaini420 – 761PDEaseInterPro annotationAdd BLAST342

Sequence similaritiesi

Belongs to the cyclic nucleotide phosphodiesterase family.UniRule annotationSAAS annotation

Phylogenomic databases

KOiK18437

Family and domain databases

CDDicd00077 HDc, 1 hit
cd00130 PAS, 1 hit
Gene3Di1.10.1300.10, 1 hit
InterProiView protein in InterPro
IPR003607 HD/PDEase_dom
IPR000014 PAS
IPR035965 PAS-like_dom_sf
IPR023088 PDEase
IPR002073 PDEase_catalytic_dom
IPR036971 PDEase_catalytic_dom_sf
IPR023174 PDEase_CS
PfamiView protein in Pfam
PF13426 PAS_9, 1 hit
PF00233 PDEase_I, 1 hit
PRINTSiPR00387 PDIESTERASE1
SMARTiView protein in SMART
SM00471 HDc, 1 hit
SM00091 PAS, 1 hit
SUPFAMiSSF55785 SSF55785, 1 hit
TIGRFAMsiTIGR00229 sensory_box, 1 hit
PROSITEiView protein in PROSITE
PS50112 PAS, 1 hit
PS00126 PDEASE_I_1, 1 hit
PS51845 PDEASE_I_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1U7RWI8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLEGMDEKQQ TVLLIFAKED NQSDGFWWAC DRAGYRCNIA RTPESALEYF
60 70 80 90 100
LDKHQEIIVI DHRSSRYFDA EAICRSIRAT KPSEHTVILA VVPRTPADQE
110 120 130 140 150
EISVLPLLHA GFDRRFMENS SITACYNELI QIEHGEVRSQ FKLRACNSVF
160 170 180 190 200
TALDQCQEAI EITSEDHVIQ YVNPAFERMM GYHKGELIGK ELTELPKSDK
210 220 230 240 250
NHADLLDTIN TCIKKGKEWQ GVYYARRKSG DSIQQHVKIT PVIGQGGKIR
260 270 280 290 300
HFVSIKKLCY TNENNKQLHK SHRDEKYAGD NSQSASHSFR CKNRRKDSID
310 320 330 340 350
VKSITSRSSD APSLQNRRYS SMARIHSMTI EAPITKVINI INAAQENSPV
360 370 380 390 400
TVAEALDRVL EILRTTELYS PQLGTKDEDP HTSDLVGGLM TDGLRRLSGN
410 420 430 440 450
EYVFSKNMNQ SHSHLSVPIA INDVPPCIAQ LLDNEESWDF NIFELEAVTN
460 470 480 490 500
KRPLVYLGLK VFTRFGVSEF LNCSEATVRA WFQVIEANYH SSNAYHNSTH
510 520 530 540 550
AADVLHATAF FLGKERVKGS LDHLDEVAAL IAATIHDVDH PGRTNSFLCN
560 570 580 590 600
AGSELAVLYN DTAVLESHHT ALAFQLTAKD NKCNIFKNID RNHYRTLRQA
610 620 630 640 650
VIDMVLATEM TKHFEHVNKF VNSINKSMAS EETNSNSEGS NCDCTANVKN
660 670 680 690 700
FPDNQTLIKR MMIKCADVAN PCRPLELCIE WAGRISEEYF AQTDEEKRQG
710 720 730 740 750
LPVVMPVFDR NTCSIPKSQI SFIDYFITDM FDAWDAFAHL PVLLQHLANN
760 770
YKHWKMLDEL KCKSLRLPSE NNN
Length:773
Mass (Da):87,761
Last modified:May 10, 2017 - v1
Checksum:i1E33C6DDE9EA0545
GO

Sequence databases

RefSeqiXP_006027147.1, XM_006027085.1

Genome annotation databases

GeneIDi102374067
KEGGiasn:102374067

Similar proteinsi

Entry informationi

Entry nameiA0A1U7RWI8_ALLSI
AccessioniPrimary (citable) accession number: A0A1U7RWI8
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2017
Last sequence update: May 10, 2017
Last modified: May 23, 2018
This is version 8 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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