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Protein
Submitted name:

transcription factor E2F6

Gene

E2F6

Organism
Alligator sinensis (Chinese alligator)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionDNA-bindingUniRule annotation
Biological processTranscription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
transcription factor E2F6Imported
Gene namesi
Name:E2F6Imported
OrganismiAlligator sinensis (Chinese alligator)Imported
Taxonomic identifieri38654 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaCrocodyliaAlligatoridaeAlligatorinaeAlligator
Proteomesi
  • UP000189705 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusUniRule annotation

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 53E2F_TDPInterPro annotationAdd BLAST53

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili69 – 89Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the E2F/DP family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

CDDicd14660 E2F_DD, 1 hit
Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR015633 E2F
IPR037241 E2F-DP_heterodim
IPR032198 E2F_CC-MB
IPR003316 E2F_WHTH_DNA-bd_dom
IPR008906 HATC_C_dom
IPR012337 RNaseH-like_sf
IPR015635 Transcription_factor_E2F6
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PANTHERiPTHR12081 PTHR12081, 1 hit
PTHR12081:SF19 PTHR12081:SF19, 1 hit
PfamiView protein in Pfam
PF05699 Dimer_Tnp_hAT, 1 hit
PF16421 E2F_CC-MB, 1 hit
PF02319 E2F_TDP, 1 hit
SMARTiView protein in SMART
SM01372 E2F_TDP, 1 hit
SUPFAMiSSF144074 SSF144074, 1 hit
SSF46785 SSF46785, 1 hit
SSF53098 SSF53098, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1U7RPM3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDLVKTAPDG ILDLNEVATT LGVRKRRVYD ITNVLDGIHL IRKRSKNLIQ
60 70 80 90 100
WVGSDLDHVA GKAPEQQKLR DELSDLSAME EALDELIKDC AHQLFELTDD
110 120 130 140 150
KENAKLAYVT YQDIHSVQAF QEQIVIAIKA PEETKLEVPA PKENCIEVRI
160 170 180 190 200
KSTKGPIDVY LCEVEQENPG VKTFEDMGTL TSETKSAVPL DEEPREKASS
210 220 230 240 250
AWEAAVTDSQ LEQGAVEQTP REAVNSPTLE VFKKSLRTSH SSLEKMPRRA
260 270 280 290 300
RVTPKERVAQ FGKDKFHTDG SVLFCTACSK AVDHIRKQTI VEHIESAKHK
310 320 330 340 350
QNEKRQREDA ETAGPSAALK KQGTVTMPFQ SSTVAKDCCD TVTLDFFRMC
360 370 380 390 400
LKADFPLHKM DLPVVRDFLS KHIKGGSAIP KSDQFYSHLP ALFEEEKQRL
410 420 430 440 450
LNDFEGNFIA VIADETADFQ NRPVFNILFQ VLKVRPPKHA DIPAPQLVKT
460 470 480 490 500
VCLGKVNHAT ISQALISCMV EFSIPLERIL TFVTDSTSYM VKAWNDVLRN
510 520 530 540 550
LWLNCVHICC YAHIVALAGN TWRDAFKQVD HFVALMKSLL VNAPACRARF
560 570 580 590 600
LRYLNEQSVD SPTLPPKPVV TRWNTWFNCV KYHAQHYQLY HGFVEYERTE
610 620 630 640 650
QGDTTVLREL ASLLAVEDLH ADLKYIAENC GRLVTALNIL ESQKRQIHKV
660 670 680 690 700
YNTVLDLISW LEHLASSTDN AKGSMAAQST ADKLRQYNVK SKQPAIDFLR
710 720 730 740 750
AVRALDPKQI GAVYTDYETV KPELKLSSEC NMEWPVYLGL VKDGFIDVED
760 770 780 790 800
PIQFWMAVED HVPKLAKYAV VLLQLTVNSV GVEKSFSKLG ILFSAQHQSL
810
TEENVAGMLQ LYFNNPD
Length:817
Mass (Da):92,197
Last modified:May 10, 2017 - v1
Checksum:iD2DD39DEAEA30274
GO

Sequence databases

RefSeqiXP_006021846.1, XM_006021784.1

Genome annotation databases

GeneIDi102368860
KEGGiasn:102368860

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_006021846.1, XM_006021784.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi102368860
KEGGiasn:102368860

Organism-specific databases

CTDi1876

Family and domain databases

CDDicd14660 E2F_DD, 1 hit
Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR015633 E2F
IPR037241 E2F-DP_heterodim
IPR032198 E2F_CC-MB
IPR003316 E2F_WHTH_DNA-bd_dom
IPR008906 HATC_C_dom
IPR012337 RNaseH-like_sf
IPR015635 Transcription_factor_E2F6
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PANTHERiPTHR12081 PTHR12081, 1 hit
PTHR12081:SF19 PTHR12081:SF19, 1 hit
PfamiView protein in Pfam
PF05699 Dimer_Tnp_hAT, 1 hit
PF16421 E2F_CC-MB, 1 hit
PF02319 E2F_TDP, 1 hit
SMARTiView protein in SMART
SM01372 E2F_TDP, 1 hit
SUPFAMiSSF144074 SSF144074, 1 hit
SSF46785 SSF46785, 1 hit
SSF53098 SSF53098, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1U7RPM3_ALLSI
AccessioniPrimary (citable) accession number: A0A1U7RPM3
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2017
Last sequence update: May 10, 2017
Last modified: November 7, 2018
This is version 11 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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