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Protein
Submitted name:

leucine-rich repeat-containing protein 16B isoform X2

Gene

Lrrc16b

Organism
Mesocricetus auratus (Golden hamster)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
leucine-rich repeat-containing protein 16B isoform X2Imported
Gene namesi
Name:Lrrc16bImported
OrganismiMesocricetus auratus (Golden hamster)Imported
Taxonomic identifieri10036 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaCricetidaeCricetinaeMesocricetus
Proteomesi
  • UP000189706 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini778 – 1063CARMIL_CInterPro annotationAdd BLAST286

Family and domain databases

Gene3Di2.30.29.30, 1 hit
3.80.10.10, 1 hit
InterProiView protein in InterPro
IPR029766 CARMIL3
IPR031943 CARMIL_C
IPR001611 Leu-rich_rpt
IPR032675 LRR_dom_sf
IPR011993 PH-like_dom_sf
PANTHERiPTHR24112:SF43 PTHR24112:SF43, 1 hit
PfamiView protein in Pfam
PF16000 CARMIL_C, 1 hit
PF13516 LRR_6, 2 hits

Sequencei

Sequence statusi: Complete.

A0A1U7R4C9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAKASVELTR ELQDSIRRCL SQGAVLQQHR VKLETKPKKF EDRVLALTSW
60 70 80 90 100
RLHLFPLKVP AKVESSFNVL EIRAFNTLSQ NQILVETERG MVSMRLPSAE
110 120 130 140 150
SVDQVTRHVS SALSKVCPGP GCLIRRGNAD TPDGPRDTSP NSETSTSTTH
160 170 180 190 200
SVCGGFSETY AALCDYNGLH CREEVQWDVD TIYHAEDNRE FNLLDFSHLE
210 220 230 240 250
SRDLALMVAA LAYNQWFTKL SCKDLRLGSE VLEQVLHTLS KSGSLEELVL
260 270 280 290 300
DNAGLKTDFV QKLAGVFGEN GSCVLHALTL SHNPIEDKGF LSLSQQLLCF
310 320 330 340 350
PTGLTKLCLA KTAISPRGLQ ALGQTFGANP AFASSLRYLD LSKNPGLLAT
360 370 380 390 400
DEANALYSFL AQPNALVHLD LSGTDCAVDL LLGALLHGCC SHLTYLNLAR
410 420 430 440 450
NSCSHRKGRE APPAFKQFFS SAYTLSHVNL SATRLPLEAL RALLQGLSLN
460 470 480 490 500
SHLSDLHLDL SSCELRSAGA QALQEQLGTV TCIGSLDLSD NGFDSDLLTL
510 520 530 540 550
VPALGKNKSL KHLFLGKNFN VKAKTLEEIL HKLVQLIQEE DCSLQSLSVA
560 570 580 590 600
DSRLKLRTSI LINALGSNTC LAKVDLSGNG MEDIGAKMLS KALQINSSLR
610 620 630 640 650
TILWDRNNTS ALGFLDIARA LESNHTLRFM SFPVSDISQA YRSAPERTED
660 670 680 690 700
VWQKIQWCLV RNNHSQTCPQ EQAFRLQQGL VTSSAEQMLQ RLCGRVQEEV
710 720 730 740 750
RALRLCPLEP VQDELLYARD LIKDAKNSRA LFPSLYELGH VLANDGPVRQ
760 770 780 790 800
RLESVASEVS KAVDKELQVI LESMVSLTQE LCPVAMRVAE GHNKMLSDVA
810 820 830 840 850
ERVTVPRNFI RGALLEQAGQ DIQNKLDEVK LSVVTYLTNS IVDEILQELY
860 870 880 890 900
HSHKSLARHL TQLRTLSDPP GGASQGQDPS RGRGRNHDHE ETDDELGTNI
910 920 930 940 950
DTMAIKKQKR CRKIRPVSAF ISGSPQDMES QLGSLGIPPG WFSGLGGSQP
960 970 980 990 1000
TAGGSWEGLS ELPTHGYKLR HQTQGRPRPP RTTPPGPGRP SVPVPGPRQE
1010 1020 1030 1040 1050
NGMATRLDEG LEDFFSRRVM DESSSYPRTL RATRPGLSEP PLPPLQKKRR
1060 1070 1080 1090 1100
RGLFHFRRPR SFKGDRGPGS PTAGLLLPPP PPPPPTQESP PSPDPPSLGN
1110 1120 1130 1140 1150
NSSPCWSPED ESSLLPGFGG TRGSTLCKKM GTERVEPGEG APAPGTMQQP
1160 1170 1180 1190 1200
RVHGVALPGL GRTKGWSFDG KREGTGPDQE DSTQAWQKRR SSDDAGPGAW
1210 1220 1230 1240 1250
KPPPPPQSSK PSFSAMRRAE ATWHIAEESA PNRSCQSPSP ASQDGEDEKE
1260 1270 1280 1290 1300
GGLFPERAVP ARNAKLQDPP IGPRPPKPVA VPRGRRAPQA PGGREEPELV
1310 1320 1330 1340 1350
SATPGVSKPR LRLGSQQDQE EPEVQGPSDL GRRTAPLKPK RTRRAQSCDK
1360 1370
LEPDRRRPPD PTGASEPGTD
Length:1,370
Mass (Da):149,775
Last modified:May 10, 2017 - v1
Checksum:i8987CBF1B25343A5
GO

Sequence databases

RefSeqiXP_005085645.1, XM_005085588.1

Genome annotation databases

GeneIDi101833369

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_005085645.1, XM_005085588.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi101833369

Organism-specific databases

CTDi90668

Family and domain databases

Gene3Di2.30.29.30, 1 hit
3.80.10.10, 1 hit
InterProiView protein in InterPro
IPR029766 CARMIL3
IPR031943 CARMIL_C
IPR001611 Leu-rich_rpt
IPR032675 LRR_dom_sf
IPR011993 PH-like_dom_sf
PANTHERiPTHR24112:SF43 PTHR24112:SF43, 1 hit
PfamiView protein in Pfam
PF16000 CARMIL_C, 1 hit
PF13516 LRR_6, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1U7R4C9_MESAU
AccessioniPrimary (citable) accession number: A0A1U7R4C9
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2017
Last sequence update: May 10, 2017
Last modified: February 28, 2018
This is version 7 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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