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Protein
Submitted name:

pre-mRNA cleavage complex 2 protein Pcf11

Gene

Pcf11

Organism
Mesocricetus auratus (Golden hamster)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
pre-mRNA cleavage complex 2 protein Pcf11Imported
Gene namesi
Name:Pcf11Imported
OrganismiMesocricetus auratus (Golden hamster)Imported
Taxonomic identifieri10036 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaCricetidaeCricetinaeMesocricetus
Proteomesi
  • UP000189706 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini14 – 142CIDInterPro annotationAdd BLAST129

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili208 – 235Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

CDDicd03562 CID, 1 hit
Gene3Di1.25.40.90, 1 hit
InterProiView protein in InterPro
IPR006569 CID_dom
IPR008942 ENTH_VHS
IPR006903 RNA_pol_II-bd
PfamiView protein in Pfam
PF04818 CTD_bind, 1 hit
SMARTiView protein in SMART
SM00582 RPR, 1 hit
SUPFAMiSSF48464 SSF48464, 1 hit
PROSITEiView protein in PROSITE
PS51391 CID, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1U7QVI8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSEQTPAEAG AAGAREDACR DYQSSLEDLT FNSKPHINML TILAEENLPF
60 70 80 90 100
AKEIVSLIEA QTAKAPSSEK LPVMYLMDSI VKNVGREYLT AFTKNLVATF
110 120 130 140 150
ICVFEKVDEN TRKSLFKLRS TWDEIFPLKK LYALDVRVNS LDPAWPIKPL
160 170 180 190 200
PPNVNTSSIH VNPKFLNKSP EEPSTPGTVV SSPSISTPPI VPDIQKNLTQ
210 220 230 240 250
EQLIRQQLLA KQKQLLELQQ KKLELELEQA KAQLAVSLSV QQETANLGPG
260 270 280 290 300
SAPSKLHVSQ IPAMAVKTPH QVPVQPDKSR PGPSLQIQDL KGTNRDPRLN
310 320 330 340 350
RMSQHSSHGK EQGHRKEFVM NTLNQSDMKT SKTVPSEKLN SSKQEKSKSS
360 370 380 390 400
ERITKKELDQ LDSKSKSKSK SPSPLKNKLS HPKDLKNQES ESMRLSDMNK
410 420 430 440 450
RDPRLKKHLQ DKAEGKDEDV KEKRKSTEKK DKDEHMKSSE HRLIGSRSKI
460 470 480 490 500
INGIVQKQDM VTEELEKQGT KPGRSSTRKR SRSRSPKSRS PIIHSPKRRD
510 520 530 540 550
RRSPKRRQRS MSPTLAPKAG KMRQSGLKQS HMEEFPPPSR EERNVKRSTK
560 570 580 590 600
QDVRDPRRLK KMDEERPQET SSQHSMKSGA EPKENIENWQ SSKSAKRWKS
610 620 630 640 650
GWEENKSLQQ GDEHSKPPHL RHRESWSSTK GILSPRTPKQ QHRLSVDANL
660 670 680 690 700
QIPKELTLAS KRELLQKTSE RLASGEITQD EFLVVVHQIR QLFQYQEGVR
710 720 730 740 750
EEQRSPFNDR FPLKRPRYED SDKPFVDGPA SRFAGLDTNQ RLTALAEDRP
760 770 780 790 800
LFDGPGRPSV TRDGPGKMIF EGPNKLSPRI DGPPTPGSLR FDGSPGQMGG
810 820 830 840 850
GGPMRFEGPQ GQLGGGCPLR FEGPPGPVGT PLRFEGPIGQ GGGGGGFRFE
860 870 880 890 900
GSPSLRFEGS AGGLRFEGPG GQPVGGLRFE GHRGQPVGGL RFDGPHGQPV
910 920 930 940 950
GNLRFDNPRG QPVGGLRFEG GHGPSGAAIR FDGPHGQPGG GIRFEGPLLQ
960 970 980 990 1000
QGVGMRFEGP HSQSVAGLRF EGHNQLGGNL RFEGPHGQPG VGIRFEGPLV
1010 1020 1030 1040 1050
QQGGGMRFEG PVPGGGLRIE GPLGQGGPRF EGCHSLRFDG QPGQPSLLPR
1060 1070 1080 1090 1100
FDGLHGQPGP RFERTGQPGP QRFDGPPGQQ VQPRFDGVPQ RFDGPQHQQA
1110 1120 1130 1140 1150
SRFDIPLGLQ GTRFDNHPSQ RLESVSFNQT APYNDPPGNA FNVPSQGLQF
1160 1170 1180 1190 1200
QRHEQIFDTP QGPNFNGPHG PGNQNFPNPL NRASGHYFDE KNLQSSQFGN
1210 1220 1230 1240 1250
FGNLPTPMSV GNIQASQQVL TGVAQPVAFG QGQQFLPVHP QNPGAFIQNP
1260 1270 1280 1290 1300
SGGLPKAYPD NHLSQVDVNE LFSKLLKTGI LKLSQPDSAT TQVNEAVAQP
1310 1320 1330 1340 1350
PPEEEEDQNE DQDVPDLTNF TIEELKQRYD SVINRLYTGI QCYSCGMRFT
1360 1370 1380 1390 1400
TSQTDVYADH LDWHYRQNRT EKDVSRKVTH RRWYYSLTDW IEFEEIADLE
1410 1420 1430 1440 1450
ERAKSQFFEK VHEEVVLKTQ EAAKEKEFQS VPAGPAGAVE SCEICQEQFE
1460 1470 1480 1490 1500
QYWDEEEEEW HLKNAIRVDG KIYHPSCYED YQNTSSFDCT PSPSKTPVEN
1510 1520 1530 1540 1550
PLNIMLNIVK NELQEPCESP KVKEEQIDAP PACSEESVAT PTEIKTENDT

VESV
Length:1,554
Mass (Da):173,073
Last modified:May 10, 2017 - v1
Checksum:i08E9422B0A1EBCDE
GO

Sequence databases

RefSeqiXP_005073992.1, XM_005073935.1

Genome annotation databases

EnsembliENSMAUT00000028630; ENSMAUP00000024610; ENSMAUG00000021407
GeneIDi101841082

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_005073992.1, XM_005073935.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMAUT00000028630; ENSMAUP00000024610; ENSMAUG00000021407
GeneIDi101841082

Organism-specific databases

CTDi51585

Family and domain databases

CDDicd03562 CID, 1 hit
Gene3Di1.25.40.90, 1 hit
InterProiView protein in InterPro
IPR006569 CID_dom
IPR008942 ENTH_VHS
IPR006903 RNA_pol_II-bd
PfamiView protein in Pfam
PF04818 CTD_bind, 1 hit
SMARTiView protein in SMART
SM00582 RPR, 1 hit
SUPFAMiSSF48464 SSF48464, 1 hit
PROSITEiView protein in PROSITE
PS51391 CID, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1U7QVI8_MESAU
AccessioniPrimary (citable) accession number: A0A1U7QVI8
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2017
Last sequence update: May 10, 2017
Last modified: September 12, 2018
This is version 8 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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