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Protein
Submitted name:

far upstream element-binding protein 1 isoform X9

Gene

FUBP1

Organism
Erinaceus europaeus (Western European hedgehog)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
far upstream element-binding protein 1 isoform X9Imported
Gene namesi
Name:FUBP1Imported
OrganismiErinaceus europaeus (Western European hedgehog)Imported
Taxonomic identifieri9365 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaInsectivoraErinaceidaeErinaceinaeErinaceus
Proteomesi
  • UP000079721 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini98 – 168KHInterPro annotationAdd BLAST71
Domaini183 – 255KHInterPro annotationAdd BLAST73
Domaini273 – 343KHInterPro annotationAdd BLAST71
Domaini374 – 447KHInterPro annotationAdd BLAST74

Family and domain databases

Gene3Di3.30.1370.10, 4 hits
InterProiView protein in InterPro
IPR015096 FUBP_C
IPR004087 KH_dom
IPR004088 KH_dom_type_1
IPR036612 KH_dom_type_1_sf
PfamiView protein in Pfam
PF09005 DUF1897, 2 hits
PF00013 KH_1, 4 hits
SMARTiView protein in SMART
SM00322 KH, 4 hits
SUPFAMiSSF54791 SSF54791, 4 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 10 potential isoforms that are computationally mapped.Show allAlign All

A0A1S3WQQ2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MADYSTVPPP SSGSGGGGGG GGGGGGVNDA FKDALQRARQ IAAKIGGDAG
60 70 80 90 100
TSLNSNDYGY GGQKRPLEDG DQPDAKKVAP QNDSFGAQLP PMHQQQRSVM
110 120 130 140 150
TEEYKVPDGM VGFIIGRGGE QISRIQQESG CKIQIAPDSG GLPERSCMLT
160 170 180 190 200
GTPESVQSAK RLLDQIVEKG RPAPGFHHGD GPGNAVQEIM IPASKAGLVI
210 220 230 240 250
GKGGETIKQL QERAGVKMVM IQDGPQNTGA DKPLRITGDP YKVQQAKEMV
260 270 280 290 300
LELIRDQGGF REVRNEYGSR IGGNEGIDVP IPRFAVGIVI GRNGEMIKKI
310 320 330 340 350
QNDAGVRIQF KPDDGTTPDR IAQITGPPDR CQHAAEIITD LLRSVQAGNP
360 370 380 390 400
GGPGPGGRGR GRGQGNWNMG PPGGLQEFNF IVPTGKTGLI IGKGGETIKS
410 420 430 440 450
ISQQSGARIE LQRNPPPNAD PNMKLFTIRG TPQQIDYARQ LIEEKIGGPV
460 470 480 490 500
NPLGPPVPHG PHGVPGPHGP PGPPGPGTPM GPYNPAPYNP GPPGPAPHGP
510 520 530 540 550
PAPYAPQGWG NAYPHWQQQA PPDPAKAGTD PNSAAWAAYY AHYYQQQAQP
560 570 580 590 600
PPAAPAGAPT TTQTNGQGNY GDQQNPAPAG QVDYTKAWEE YYKKMGQAVP
610 620 630 640 650
APAGAPPGGQ PDYSAAWAEY YRQQAAYYAQ TSPQGMPQHP PAPQGFANHA

RSHQHLY
Length:657
Mass (Da):69,054
Last modified:April 12, 2017 - v1
Checksum:i19E53CD515D34F3D
GO

Computationally mapped potential isoform sequencesi

There are 10 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1S3WQP7A0A1S3WQP7_ERIEU
far upstream element-binding protei...
FUBP1
688Annotation score:
A0A1S3WQ27A0A1S3WQ27_ERIEU
far upstream element-binding protei...
FUBP1
699Annotation score:
A0A1S3AFF6A0A1S3AFF6_ERIEU
far upstream element-binding protei...
FUBP1
655Annotation score:
A0A1S3WQ65A0A1S3WQ65_ERIEU
far upstream element-binding protei...
FUBP1
654Annotation score:
A0A1S3WQ31A0A1S3WQ31_ERIEU
far upstream element-binding protei...
FUBP1
678Annotation score:
A0A1S3WQB3A0A1S3WQB3_ERIEU
far upstream element-binding protei...
FUBP1
677Annotation score:
A0A1S3WQ37A0A1S3WQ37_ERIEU
far upstream element-binding protei...
FUBP1
676Annotation score:
A0A1S3WQ32A0A1S3WQ32_ERIEU
far upstream element-binding protei...
FUBP1
696Annotation score:
A0A1S3WQ60A0A1S3WQ60_ERIEU
far upstream element-binding protei...
FUBP1
679Annotation score:
A0A1S3WQA8A0A1S3WQA8_ERIEU
far upstream element-binding protei...
FUBP1
698Annotation score:

Sequence databases

RefSeqiXP_016048484.1, XM_016192998.1

Genome annotation databases

GeneIDi103123551

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_016048484.1, XM_016192998.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi103123551

Organism-specific databases

CTDi8880

Family and domain databases

Gene3Di3.30.1370.10, 4 hits
InterProiView protein in InterPro
IPR015096 FUBP_C
IPR004087 KH_dom
IPR004088 KH_dom_type_1
IPR036612 KH_dom_type_1_sf
PfamiView protein in Pfam
PF09005 DUF1897, 2 hits
PF00013 KH_1, 4 hits
SMARTiView protein in SMART
SM00322 KH, 4 hits
SUPFAMiSSF54791 SSF54791, 4 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1S3WQQ2_ERIEU
AccessioniPrimary (citable) accession number: A0A1S3WQQ2
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: October 25, 2017
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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