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Protein
Submitted name:

protein sidekick-2 isoform X9

Gene

sdk2

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
protein sidekick-2 isoform X9Imported
Gene namesi
Name:sdk2Imported
OrganismiSalmo salar (Atlantic salmon)Imported
Taxonomic identifieri8030 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo
Proteomesi
  • UP000087266 Componenti: Genome assembly

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei1711 – 1734HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 60Ig-likeInterPro annotationAdd BLAST60
Domaini74 – 164Ig-likeInterPro annotationAdd BLAST91
Domaini168 – 257Ig-likeInterPro annotationAdd BLAST90
Domaini262 – 353Ig-likeInterPro annotationAdd BLAST92
Domaini358 – 454Fibronectin type-IIIInterPro annotationAdd BLAST97
Domaini459 – 555Fibronectin type-IIIInterPro annotationAdd BLAST97
Domaini560 – 659Fibronectin type-IIIInterPro annotationAdd BLAST100
Domaini663 – 757Fibronectin type-IIIInterPro annotationAdd BLAST95
Domaini761 – 860Fibronectin type-IIIInterPro annotationAdd BLAST100
Domaini865 – 963Fibronectin type-IIIInterPro annotationAdd BLAST99
Domaini968 – 1065Fibronectin type-IIIInterPro annotationAdd BLAST98
Domaini1069 – 1163Fibronectin type-IIIInterPro annotationAdd BLAST95
Domaini1167 – 1265Fibronectin type-IIIInterPro annotationAdd BLAST99
Domaini1270 – 1387Fibronectin type-IIIInterPro annotationAdd BLAST118
Domaini1392 – 1488Fibronectin type-IIIInterPro annotationAdd BLAST97
Domaini1492 – 1604Fibronectin type-IIIInterPro annotationAdd BLAST113
Domaini1605 – 1704Fibronectin type-IIIInterPro annotationAdd BLAST100

Keywords - Domaini

RepeatSAAS annotation, Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

CDDicd00063 FN3, 13 hits
Gene3Di2.60.40.10, 17 hits
InterProiView protein in InterPro
IPR003961 FN3_dom
IPR036116 FN3_sf
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR013098 Ig_I-set
IPR003599 Ig_sub
IPR003598 Ig_sub2
PfamiView protein in Pfam
PF00041 fn3, 13 hits
PF07679 I-set, 2 hits
SMARTiView protein in SMART
SM00060 FN3, 13 hits
SM00409 IG, 4 hits
SM00408 IGc2, 4 hits
SUPFAMiSSF48726 SSF48726, 4 hits
SSF49265 SSF49265, 7 hits
PROSITEiView protein in PROSITE
PS50853 FN3, 13 hits
PS50835 IG_LIKE, 4 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 9 potential isoforms that are computationally mapped.Show allAlign All

A0A1S3Q5W9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MECVANARPL IKLSITWRKN RVLVTSGLSD FNRRLTIISP VVSDSGFYEC
60 70 80 90 100
EVVLRSSSVP SVNAGAYLHV QEPPQFVKEP EKHITAEMEK VVDIPCQARG
110 120 130 140 150
VPQPDIVWYK DAVPISPVKT PRYRVLVGGS LQVNGLLPDD TGMFQCFARN
160 170 180 190 200
LAGEVQTNTY LAVTSIAPNI TAGPSDSTVI DGMSIILHCE TSGAPRPAIT
210 220 230 240 250
WQKGERVLAS GSVQLPRFTL LESGSLLISP SHLSDAGTYT CMASNSRGID
260 270 280 290 300
EAAADLLVWA RTRINTPPQD QSVIKGTKAT MTCGVTHDPS VTVRYVWEKE
310 320 330 340 350
GSVINAQSIP RIRLDPDGTL HISQTWSGDI GTYTCRVTSV GGNDSRSAHL
360 370 380 390 400
RVRQLPYAPE NPVSLLSSSE KRAINLTWAK PFDGNSPLIH YVLEVSENNA
410 420 430 440 450
PWAILLANIE PESTAVTVSG LIPARSYQFR LCAVNDVGKG QFSKETDRVS
460 470 480 490 500
LPEEPPSAPP QNVIASGRTN QSIMIQWQPP PESHQNGILR GYSVRYRLTG
510 520 530 540 550
LPVDYQSKNI SKPDVTNLLL EDLIIWTNYE IEVAAYNWAG LGTFSHKVTE
560 570 580 590 600
WTLQGVPTIA PSNVQAEAVN STTIRITWAA PNPQFINGIN QGYKLLAWEP
610 620 630 640 650
GQEEEVTMVT VRPNFQDSVH VGYVTGLKKF REYYTSVLCF TTPGDGPRSP
660 670 680 690 700
AKGLRTHEDT PGAVGHLSFT DILDTSLKVS WREPGEKNGV LTGYRISWEE
710 720 730 740 750
FNRTNTRVTH YLPNVTLEYR VTGLTALTTY TIEVAGMTSK GQGQLSSSTI
760 770 780 790 800
SSGVPPELPG PPTNMAISNI GPRSITLQFK PGYDGKTSIS RWQVEAQVSV
810 820 830 840 850
IGDNEDWVIV HQLPNEPDAR SMEVPGLNPY TFYRFRMRQV NIVGTSPPSQ
860 870 880 890 900
PSRKIQTLQA PPDMSPANVT LRTASETSLW LRWVPLPEWE YNGNPDLLGY
910 920 930 940 950
RLQYSRTSSQ GKALTHVIAD RLEREFTIED LEEWTEYEVR VQALNGIGAG
960 970 980 990 1000
PWSQPVRGRT RESVPSCGPT NMSAFATTSS SILVRWFEVP EQDRNGLILG
1010 1020 1030 1040 1050
YKVLYKEKDS DSSLQLWTIE GNASHSVQLT GLGKYVLYEI QVLAFTRIGD
1060 1070 1080 1090 1100
GIPSSPLILE RTLDDVPGPP VGILFPEVRT TSVRLIWQSP SQPNGIILAY
1110 1120 1130 1140 1150
QITYRLNSSN SNTATVDVLN PSARQYMVTG LKKDSMYVFR ITAQTRKGWG
1160 1170 1180 1190 1200
EAAEALVVTT EKRARPQPTN RPMVPQMDVQ ARSVLLSWEP GSDGLSPVRY
1210 1220 1230 1240 1250
YTVQLRELPD SNWTIHSASV THEASSYIVG RLKPFTSYQF RVKATNDIGD
1260 1270 1280 1290 1300
SEYSEESEAI TTLQDAPDEA PTILSVTPHT TTSVLIRWQP PSEEKINGIL
1310 1320 1330 1340 1350
LGFRIRYREL LYDRLRSFSV RTANSPSATW AELTSPYSVR NLSESSLTQY
1360 1370 1380 1390 1400
ELDNLSKHKR YEIRMSVYNV VGEGPTSTPQ EVFVGEAVPT APPQNVAIQT
1410 1420 1430 1440 1450
ATATQLDVTW ESPPLDTQNG DIQGYKVYFW EFQRKNETER LRTLFLPEGG
1460 1470 1480 1490 1500
VKLKNLTGYT TYMISVAPFN AAGDGPRSPP IRGRTQQAAP SAPSFIHFSE
1510 1520 1530 1540 1550
LTTTSVNVSW GEPTYPNGIL EGYRLVYEPC TPVDESTVAC ADCLHSPSPP
1560 1570 1580 1590 1600
GVSKIVTVDV KGAPFWMKIK DLADGVTYNF RIRAKTFTYG PEVEANITMG
1610 1620 1630 1640 1650
PGEGAPGPPG EPFISRYGSA LTIHWANGDP GRSPITRYVI EARPSDEGLW
1660 1670 1680 1690 1700
DILIKDIPKE VTSYTFNMDI LKQGVSYDFR VIGVNDYGYG SPSPPSASIS
1710 1720 1730 1740 1750
AKKVAPFYEE WWFLVVVALV GLIFILLLVF ILIIRGQSKK YAKKSESVSP
1760 1770 1780 1790 1800
YVCSSGNNSN CNALTHGDMV SLDEGRFPAL ELNNRRLSVK NSFCRKNGVY
1810 1820 1830 1840 1850
TRSPPRPSPG SLNYSDEDLS TTKYNDLIPA ETSSLTEKPS EISDSQVPTE
1860 1870 1880 1890 1900
ALVFSYGTGG LRVLPLNWGS DSEYEVDQNR QKTHSFVSHY ISDPTYYNSW
1910 1920 1930 1940 1950
RRQQKGISRA QAYSYTESES GDQEPCAPPP PLPPLPPQLT STTPPLKLQT
1960 1970 1980 1990 2000
QGQPQGLPPQ GQGSLFRPKG SRTPTPSQQL STSTPSSHSN TLSYWPPSSP
2010
SPAHGSRAPI AGFSSFV
Length:2,017
Mass (Da):222,519
Last modified:April 12, 2017 - v1
Checksum:i58B797F2B06A7138
GO

Computationally mapped potential isoform sequencesi

There are 9 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1S3Q5M0A0A1S3Q5M0_SALSA
protein sidekick-2 isoform X1
sdk2
2,275Annotation score:
A0A1S3Q5W4A0A1S3Q5W4_SALSA
protein sidekick-2 isoform X5
sdk2
2,256Annotation score:
A0A1S3Q5Q1A0A1S3Q5Q1_SALSA
protein sidekick-2 isoform X7
sdk2
2,253Annotation score:
A0A1S3Q5N7A0A1S3Q5N7_SALSA
protein sidekick-2 isoform X3
sdk2
2,267Annotation score:
A0A1S3Q7B8A0A1S3Q7B8_SALSA
protein sidekick-2 isoform X2
sdk2
2,272Annotation score:
A0A1S3Q5U4A0A1S3Q5U4_SALSA
protein sidekick-2 isoform X8
sdk2
2,229Annotation score:
A0A1S3Q5T9A0A1S3Q5T9_SALSA
protein sidekick-2 isoform X4
sdk2
2,259Annotation score:
A0A1S3Q7C3A0A1S3Q7C3_SALSA
protein sidekick-2 isoform X6
sdk2
2,256Annotation score:
A0A1S3Q7C8A0A1S3Q7C8_SALSA
protein sidekick-2 isoform X10
sdk2
1,930Annotation score:

Sequence databases

RefSeqiXP_014035302.1, XM_014179827.1

Genome annotation databases

GeneIDi106589619

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_014035302.1, XM_014179827.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi106589619

Organism-specific databases

CTDi54549

Family and domain databases

CDDicd00063 FN3, 13 hits
Gene3Di2.60.40.10, 17 hits
InterProiView protein in InterPro
IPR003961 FN3_dom
IPR036116 FN3_sf
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR013098 Ig_I-set
IPR003599 Ig_sub
IPR003598 Ig_sub2
PfamiView protein in Pfam
PF00041 fn3, 13 hits
PF07679 I-set, 2 hits
SMARTiView protein in SMART
SM00060 FN3, 13 hits
SM00409 IG, 4 hits
SM00408 IGc2, 4 hits
SUPFAMiSSF48726 SSF48726, 4 hits
SSF49265 SSF49265, 7 hits
PROSITEiView protein in PROSITE
PS50853 FN3, 13 hits
PS50835 IG_LIKE, 4 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1S3Q5W9_SALSA
AccessioniPrimary (citable) accession number: A0A1S3Q5W9
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: November 7, 2018
This is version 7 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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