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Protein
Submitted name:

ganglioside-induced differentiation-associated protein 2 isoform X2

Gene

gdap2

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
ganglioside-induced differentiation-associated protein 2 isoform X2Imported
Gene namesi
Name:gdap2Imported
OrganismiSalmo salar (Atlantic salmon)Imported
Taxonomic identifieri8030 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo
Proteomesi
  • UP000087266 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini45 – 225MacroInterPro annotationAdd BLAST181

Family and domain databases

CDDicd02905 Macro_GDAP2_like, 1 hit
cd00170 SEC14, 1 hit
Gene3Di3.40.525.10, 1 hit
InterProiView protein in InterPro
IPR001251 CRAL-TRIO_dom
IPR036865 CRAL-TRIO_dom_sf
IPR002589 Macro_dom
IPR035793 Macro_GDAP2
PfamiView protein in Pfam
PF13716 CRAL_TRIO_2, 1 hit
PF01661 Macro, 1 hit
SMARTiView protein in SMART
SM00506 A1pp, 1 hit
SUPFAMiSSF52087 SSF52087, 1 hit
PROSITEiView protein in PROSITE
PS51154 MACRO, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

A0A1S3PPE9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDPLGARSQF VEVQTLSTWE RQPDPEGEET EKEYTDSLVS QEAFPSPFPY
60 70 80 90 100
REDINRKIVL YNGDVALLNC TAIVNTSNET LTDKNPISES ILLHAGPELR
110 120 130 140 150
DELLKLNGCR TGEAKMTKGF NLAARFIIHT VGPKYKAKYR TAAESSLYSC
160 170 180 190 200
YRNVMQLAKE QAMASVAFCV VSTTKRGYAL EDATHIAFRT VRRFLENHGK
210 220 230 240 250
SIEMVVFAVT DMEEPTYRKL LPLYYPRSEE EERASLPLIP ADIGNSEGEP
260 270 280 290 300
VVPERQIRIA EKPGSLEDDC EEETLDSDLG QVGNHAFARM EGDVDKQRKL
310 320 330 340 350
ILQGQLSDAT IHKQHQRNYN RWLCRARAED LSDIAALKAL YQTGVDMCGR
360 370 380 390 400
TVMVLVGRNI PVTLIDMEKA LLYFIHVMDH ITVKEYAMVY FHTLTGEHNH
410 420 430 440
LDPEFLKKLY EIVDAKFKKN LRAFYFVHPS FRSKVNGAYR PAHSSSL
Length:447
Mass (Da):50,808
Last modified:April 12, 2017 - v1
Checksum:iA495E7AE3081E6E6
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1S3PPD1A0A1S3PPD1_SALSA
ganglioside-induced differentiation...
gdap2
495Annotation score:
A0A1S3PQK7A0A1S3PQK7_SALSA
ganglioside-induced differentiation...
gdap2
419Annotation score:

Sequence databases

RefSeqiXP_014029543.1, XM_014174068.1

Genome annotation databases

GeneIDi106586605

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_014029543.1, XM_014174068.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi106586605

Organism-specific databases

CTDi54834

Family and domain databases

CDDicd02905 Macro_GDAP2_like, 1 hit
cd00170 SEC14, 1 hit
Gene3Di3.40.525.10, 1 hit
InterProiView protein in InterPro
IPR001251 CRAL-TRIO_dom
IPR036865 CRAL-TRIO_dom_sf
IPR002589 Macro_dom
IPR035793 Macro_GDAP2
PfamiView protein in Pfam
PF13716 CRAL_TRIO_2, 1 hit
PF01661 Macro, 1 hit
SMARTiView protein in SMART
SM00506 A1pp, 1 hit
SUPFAMiSSF52087 SSF52087, 1 hit
PROSITEiView protein in PROSITE
PS51154 MACRO, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1S3PPE9_SALSA
AccessioniPrimary (citable) accession number: A0A1S3PPE9
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: October 25, 2017
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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