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Protein
Submitted name:

transmembrane protein 80 isoform X2

Gene

tmem80

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
transmembrane protein 80 isoform X2Imported
Gene namesi
Name:tmem80Imported
OrganismiSalmo salar (Atlantic salmon)Imported
Taxonomic identifieri8030 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo
Proteomesi
  • UP000087266 Componenti: Genome assembly

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei20 – 42HelicalSequence analysisAdd BLAST23
Transmembranei54 – 74HelicalSequence analysisAdd BLAST21
Transmembranei86 – 110HelicalSequence analysisAdd BLAST25
Transmembranei116 – 140HelicalSequence analysisAdd BLAST25

Keywords - Cellular componenti

Membrane

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

InterProiView protein in InterPro
IPR019184 Uncharacterised_TM-17
PANTHERiPTHR13531 PTHR13531, 1 hit
PfamiView protein in Pfam
PF09799 Transmemb_17, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

A0A1S3PDW3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAANRAGKSA VVLSSVPLQL LLYLTALYYV FYFLSTLCMI IYKSRVMSYP
60 70 80 90 100
DDLLTQDLGL LFFMACLELL RLYCGVRGNL QETEGYMWAN LAMTVATALL
110 120 130 140 150
SVYFLVWQLY VMHADVIINA ILLSVYGLGG VLGLATLARF TSVTVYRLLR

L
Length:151
Mass (Da):16,946
Last modified:April 12, 2017 - v1
Checksum:i0D358499516D57D7
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1S3PE31A0A1S3PE31_SALSA
transmembrane protein 80 isoform X1
tmem80
176Annotation score:
A0A1S3PE43A0A1S3PE43_SALSA
transmembrane protein 80 isoform X3
tmem80
145Annotation score:

Sequence databases

RefSeqiXP_014025873.1, XM_014170398.1
UniGeneiSsa.32752

Genome annotation databases

GeneIDi106584801

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_014025873.1, XM_014170398.1
UniGeneiSsa.32752

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi106584801

Organism-specific databases

CTDi283232

Family and domain databases

InterProiView protein in InterPro
IPR019184 Uncharacterised_TM-17
PANTHERiPTHR13531 PTHR13531, 1 hit
PfamiView protein in Pfam
PF09799 Transmemb_17, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1S3PDW3_SALSA
AccessioniPrimary (citable) accession number: A0A1S3PDW3
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: November 22, 2017
This is version 6 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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