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Protein
Submitted name:

integrin beta-like protein 1

Gene

itgbl1

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Keywordsi

Molecular functionIntegrinImported

Names & Taxonomyi

Protein namesi
Submitted name:
integrin beta-like protein 1Imported
Gene namesi
Name:itgbl1Imported
OrganismiSalmo salar (Atlantic salmon)Imported
Taxonomic identifieri8030 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo
Proteomesi
  • UP000087266 Componenti: Genome assembly

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 24Sequence analysisAdd BLAST24
ChainiPRO_501032092925 – 485Sequence analysisAdd BLAST461

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini85 – 117EGF-likeInterPro annotationAdd BLAST33
Domaini174 – 207EGF-likeInterPro annotationAdd BLAST34
Domaini265 – 301EGF-likeInterPro annotationAdd BLAST37
Domaini357 – 395EGF-likeInterPro annotationAdd BLAST39
Domaini446 – 478EGF-likeInterPro annotationAdd BLAST33

Keywords - Domaini

SignalSequence analysis

Family and domain databases

InterProiView protein in InterPro
IPR000742 EGF-like_dom
IPR013111 EGF_extracell
IPR027070 Integrin_b-like_p1
IPR015812 Integrin_bsu
PANTHERiPTHR10082 PTHR10082, 1 hit
PTHR10082:SF3 PTHR10082:SF3, 1 hit
PfamiView protein in Pfam
PF07974 EGF_2, 5 hits
SMARTiView protein in SMART
SM00181 EGF, 5 hits
PROSITEiView protein in PROSITE
PS00243 INTEGRIN_BETA, 6 hits

Sequencei

Sequence statusi: Complete.

A0A1S3NV28-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRAEVLVNCM LVPLLLILLT AVEQSLLQSL GQVCTLSAES SQRRCKTPEG
60 70 80 90 100
LICSGRGECD CGACICQVAE PGNYYGPRCE CHDWVCATYD GKTCGGHGVC
110 120 130 140 150
HCGKCECDED WFGEACQYQE DCNLTNKKSK ELCRNPQGVV CSNAGSCHCG
160 170 180 190 200
SCMCHNPDGK SLVTGRFCEC DDSECLDEDT GEVCGGHGQC YCGNCYCAAG
210 220 230 240 250
WHGDKCELQC DISPWESKRR CTSPDGKICS NRGTCICGEC TCYDVDPSGD
260 270 280 290 300
WGDIHGDTCE CDERSCHATY DRYSDDFCSG HGQCNCGRCD CKEGWMGKKC
310 320 330 340 350
EHPLSCSLSL ESSLKKCKGT SNMPCFGRGL CQCGQCTCHP PGDTRVHGRN
360 370 380 390 400
CECDDRQCED ISGEICGGHG FCSCGRCICG DGWFGKLCSF PRTCEMTDAQ
410 420 430 440 450
SKELCETADG VMCNGKGSCH CGRCICSGSP QDWWVSGDYC ECDDRECDKH
460 470 480
DGLICTGNGM CNCGNCDCWD GWTGNACEIW VGTEY
Length:485
Mass (Da):52,604
Last modified:April 12, 2017 - v1
Checksum:iDD209AF0452ADD8F
GO

Sequence databases

RefSeqiXP_014019268.1, XM_014163793.1

Genome annotation databases

GeneIDi106581641
KEGGisasa:106581641

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_014019268.1, XM_014163793.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi106581641
KEGGisasa:106581641

Organism-specific databases

CTDi9358

Family and domain databases

InterProiView protein in InterPro
IPR000742 EGF-like_dom
IPR013111 EGF_extracell
IPR027070 Integrin_b-like_p1
IPR015812 Integrin_bsu
PANTHERiPTHR10082 PTHR10082, 1 hit
PTHR10082:SF3 PTHR10082:SF3, 1 hit
PfamiView protein in Pfam
PF07974 EGF_2, 5 hits
SMARTiView protein in SMART
SM00181 EGF, 5 hits
PROSITEiView protein in PROSITE
PS00243 INTEGRIN_BETA, 6 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1S3NV28_SALSA
AccessioniPrimary (citable) accession number: A0A1S3NV28
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: February 28, 2018
This is version 6 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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