Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

THUMP domain-containing protein 2

Gene

thumpd2

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
THUMP domain-containing protein 2Imported
Gene namesi
Name:thumpd2Imported
OrganismiSalmo salar (Atlantic salmon)Imported
Taxonomic identifieri8030 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo
Proteomesi
  • UP000087266 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini171 – 264THUMPInterPro annotationAdd BLAST94

Family and domain databases

InterProiView protein in InterPro
IPR000241 RNA_methylase_dom
IPR029063 SAM-dependent_MTases
IPR004114 THUMP_dom
PfamiView protein in Pfam
PF02926 THUMP, 1 hit
PF01170 UPF0020, 1 hit
SMARTiView protein in SMART
SM00981 THUMP, 1 hit
SUPFAMiSSF53335 SSF53335, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1S3N553-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNDSNCQCAA LQFYCTAGNG MEPFLIQEVK TKLAAKDVDH IPGKVFFTTS
60 70 80 90 100
FEIKQVRELK SAERLFLLLK RHSPLSGHTA KTPSGIQSRL MGDGSDWTRA
110 120 130 140 150
VLSWRCLQRD LMMRSDCTLS VALPGRKRKR EEEEVKESGV EGSTCNGPNG
160 170 180 190 200
AQKLGLEGER RELGPSKDHI SSTEDSGRVN CVAGDKVEED RIEGSRDRKT
210 220 230 240 250
STVSFRVSCR CSGALSRRFS PQDLSRIIGT AASRQLGWRV DLRKPDLEVN
260 270 280 290 300
VYMSDDHCVL GIPLLRLPLA NRSYMKTTGL RSTIAWAMAS LSDIKPGSCV
310 320 330 340 350
IDPMCGVGTI LLEAAHEYQD AFFLGLDIDE SQLVKADQNV EFAKFGDRVQ
360 370 380 390 400
LLQASSKEIP LPSCSVDVVV CDVPFGKKFG TKTGMAASLP VIVREMERVL
410 420 430 440 450
CVGGTLVLLL SPQLSCLLKK SMTPRPVPSH TQGEGTGVGL GGDVDPSHTP
460 470 480 490 500
SLFPSLQPLS YHRVSLGAID ALIHKYVKIL TATTTLSGPD CIHTLNPCIV

EPE
Length:503
Mass (Da):54,860
Last modified:April 12, 2017 - v1
Checksum:i9687A001D558CB81
GO

Sequence databases

RefSeqiXP_014010440.1, XM_014154965.1

Genome annotation databases

GeneIDi106577157
KEGGisasa:106577157

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_014010440.1, XM_014154965.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi106577157
KEGGisasa:106577157

Organism-specific databases

CTDi80745

Family and domain databases

InterProiView protein in InterPro
IPR000241 RNA_methylase_dom
IPR029063 SAM-dependent_MTases
IPR004114 THUMP_dom
PfamiView protein in Pfam
PF02926 THUMP, 1 hit
PF01170 UPF0020, 1 hit
SMARTiView protein in SMART
SM00981 THUMP, 1 hit
SUPFAMiSSF53335 SSF53335, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1S3N553_SALSA
AccessioniPrimary (citable) accession number: A0A1S3N553
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: February 28, 2018
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again