Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

bromodomain adjacent to zinc finger domain protein 2A isoform X3

Gene

baz2a

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
bromodomain adjacent to zinc finger domain protein 2A isoform X3Imported
Gene namesi
Name:baz2aImported
OrganismiSalmo salar (Atlantic salmon)Imported
Taxonomic identifieri8030 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo
Proteomesi
  • UP000087266 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1041 – 1112MBDInterPro annotationAdd BLAST72
Domaini1383 – 1448DDTInterPro annotationAdd BLAST66
Domaini2192 – 2242PHD-typeInterPro annotationAdd BLAST51
Domaini2340 – 2410BromoInterPro annotationAdd BLAST71

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili1220 – 1251Sequence analysisAdd BLAST32
Coiled coili1311 – 1355Sequence analysisAdd BLAST45
Coiled coili1568 – 1588Sequence analysisAdd BLAST21

Keywords - Domaini

BromodomainPROSITE-ProRule annotationSAAS annotation, Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Family and domain databases

CDDicd05503 Bromo_BAZ2A_B_like, 1 hit
Gene3Di1.20.920.10, 1 hit
3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR037374 BAZ2A/B_Bromo
IPR001487 Bromodomain
IPR036427 Bromodomain-like_sf
IPR018359 Bromodomain_CS
IPR018501 DDT_dom
IPR016177 DNA-bd_dom_sf
IPR001739 Methyl_CpG_DNA-bd
IPR028940 TIP5
IPR028941 WHIM2_dom
IPR011011 Znf_FYVE_PHD
IPR001965 Znf_PHD
IPR019787 Znf_PHD-finger
IPR013083 Znf_RING/FYVE/PHD
PANTHERiPTHR22880:SF141 PTHR22880:SF141, 1 hit
PfamiView protein in Pfam
PF00439 Bromodomain, 1 hit
PF02791 DDT, 1 hit
PF01429 MBD, 1 hit
PF00628 PHD, 1 hit
PF15613 WSD, 1 hit
PRINTSiPR00503 BROMODOMAIN
SMARTiView protein in SMART
SM00297 BROMO, 1 hit
SM00571 DDT, 1 hit
SM00391 MBD, 1 hit
SM00249 PHD, 1 hit
SUPFAMiSSF47370 SSF47370, 1 hit
SSF54171 SSF54171, 1 hit
SSF57903 SSF57903, 1 hit
PROSITEiView protein in PROSITE
PS00633 BROMODOMAIN_1, 1 hit
PS50014 BROMODOMAIN_2, 1 hit
PS50827 DDT, 1 hit
PS50982 MBD, 1 hit
PS50016 ZF_PHD_2, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

A0A1S3LJ20-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MVSNGIPYYQ PQHPPLPAPQ PQAQMMPPTS QNFTPPRGSP QHHQMGQGGP
60 70 80 90 100
GSPLPMAVSS VPIMSPSTMA DSGSPQSQTR ERSPHGGSVA MPAVMQGRMS
110 120 130 140 150
EAFKDVDEGY NGMERTSVAQ RLPKSDSYPP KPPGPPMGPT SDDCQRSKQP
160 170 180 190 200
MAQHHEMTTL ARESALPEPP HSMSAPPPVV STPPSAKAAT PPRVSAPPAV
210 220 230 240 250
SMAHMSASGP PVVTSTPPVS SAPSPPVLGP PPRLSSPPLM LQGLRPFPVS
260 270 280 290 300
VSTLPSVVSP PSVSAPPPKP PALPPLLDKS SRPPSVSAPH PVSAPPPVSV
310 320 330 340 350
AHQTAHTTSA PPAMVSTSTM VSAPPHSMSV PISALQQMVQ GSRLPPLTSS
360 370 380 390 400
PPALFGAPRE KFWTSSSMSA SAPSPAVSTH SVAVMAPPSA VSRPHSAVSS
410 420 430 440 450
RSISLSSLSQ SVSTRLPAVS ASPTVSVSVV SSFPKEVSMP PLTVHGPRAL
460 470 480 490 500
PLSGLPPLTS QTSRAPPLSV PLAMMTAPLV VPSAPALSAP PPPQAPKRMV
510 520 530 540 550
PPEPEERCMG NMKYMGNMKG PSVEADTVKT SSKIDSAGSP TRQCEKHSNK
560 570 580 590 600
PLTVIPGTTP HPKNQEDSFG DQVCAEKNDT TPMSGADIPL EKGSLDDICV
610 620 630 640 650
TDESTVDESF DESLQAESIR LDSTRMEDPS LTEDDDISNN SSFDDTSRLD
660 670 680 690 700
DISSMNDTSR LDDISCVDGD NSRFDDTSRT DDDTSRFDDS SRVDGNKSQF
710 720 730 740 750
DYSARMDDSA CMDDSARMEE TSHVGDTTMD SSFSSVEDSR ELTLDDTQTE
760 770 780 790 800
NVSRAEETMD SCLSTEESMQ ESSLNNTSQM QDSSVDLSQN DISRSSSNGP
810 820 830 840 850
AKPIPAYKGS EGDREAEVWD IPDSTGTTST KASAATIMAP PVIMDNGKHT
860 870 880 890 900
AALSALVESL VGAPLLPLAA PAVPTTGQKT KTPRKPRKPR TQVASIPVPQ
910 920 930 940 950
YPGKAQRKSA IKTPKVEKIK VERRKKKQLE VGENKEKGPP RKRKKIEPVA
960 970 980 990 1000
ATGEPEHSAE GLLPGQSGPV TTIGKPCLTI GETPPVVKPK KVRVKKVSVL
1010 1020 1030 1040 1050
EPKPHKIAKM DIDTKPNDDD DNNINDGDDS STAGDTPRRR IATEEQVHFP
1060 1070 1080 1090 1100
LLHGWRREIR VKKNEDRLKG ETWYYSPCGR RMKQFPEVIK YLNRHQDTAV
1110 1120 1130 1140 1150
TREHFSFSPR MPVGDFYEER DSTEGVKWCL LANEEVPSMI MAITGRRGRP
1160 1170 1180 1190 1200
PNPDKEMPRP RARRTKGGPV RKPGRPPKPK MVDLLSKVDA RMLKRLEAKD
1210 1220 1230 1240 1250
GLTEEDKEKL VKIKKKMKRK ARMKRKEDNK NKKIRQEKKQ AKLDKETKEV
1260 1270 1280 1290 1300
KAEPADQEAS QPAPPQPPTP EPKKRGPRKK VEVPPPVVET DQERLAKGKR
1310 1320 1330 1340 1350
VLGARSRAKA LAKAQAEAEA AAQAALAAKK QVERRAQAQR RLEERKRQQM
1360 1370 1380 1390 1400
ILEELKKPTE DMCLTDHQPL PELSRIPGLV LSGVAFSHCL AVVEFLYSYG
1410 1420 1430 1440 1450
KVLGLHIPSD VPSLSTLQEG LLGLGDSQSE VQDLLIKLVE AALHDPGLPP
1460 1470 1480 1490 1500
YYQSVKILGE KLVDLELTRS TVSEGLRIFL ESHGFDMEVC NVLRTKTFLT
1510 1520 1530 1540 1550
LNPDTKAAIL GFLVEELNGS NIVISEIDNT LENRATYRKN KWIIEGKLRK
1560 1570 1580 1590 1600
LKAALARRTG RSEEELYLEE RRRSARVAEE ENLSLEESSG PMERGSRRRT
1610 1620 1630 1640 1650
PKEEPKLSET DSPTNASIPE LERQIDKLTK RQVFFRKKLL QSSHSLRAVS
1660 1670 1680 1690 1700
LGQDRFRRRY WLLPHLGGVL VEGPEEILAT EDILVKEVTV TLLKREPKVE
1710 1720 1730 1740 1750
EMPTTTPAPP VSSPPPQSQN SLPPKEDPLP GTASLMSSPR ARGRPRKIKP
1760 1770 1780 1790 1800
EVELHLRTAK CRRRRRSSKS GGEESGVSLE TTTTNGTEDL TQSAFSNCLS
1810 1820 1830 1840 1850
QLQGALTNGT EPATGMAPKG RLPEDSVKEM AEKQGQWFNL LPKQPCDKTS
1860 1870 1880 1890 1900
LTEPQAPPSK PPKRLPLTPS TLPALAAPLL QSVPDPTPQV TPSPAKPGRR
1910 1920 1930 1940 1950
RRRGGSPARR VGARGAAAKR RGRPSSTLFQ EIEQQYFTQL VVKPIPASMV
1960 1970 1980 1990 2000
RGWWWIKEPE DLTATLQALH PRGIREKVLH KHLAKHMEYL AEVCTRPIND
2010 2020 2030 2040 2050
PIFQVKVKEG EALLESLQQP WQVQERALET DVGALRWVED LEQRVIAADL
2060 2070 2080 2090 2100
HLKPYTVPEV DSTRDDLQYY EHDVDPRDDW IVRTKKEWSD LPRVASHPLD
2110 2120 2130 2140 2150
LAVLRLANLE RNIDRRYLKE PLWNLAEVVR LAPLTPEESQ MGQMDVMSLE
2160 2170 2180 2190 2200
SEITPRLRTW RQALDRCRSA PQLCLCLLQL EKAIAWERSV VKVTCQVCRK
2210 2220 2230 2240 2250
GDNDEYLLLC DGCDRGCHMY CLRPKVTQVP EGDWFCPTCV SKASDGESPR
2260 2270 2280 2290 2300
SNHRSSKQRT RVKKRRYEDD SSDEEVVPSR RSGGGASMAT RHKDAGPASS
2310 2320 2330 2340 2350
SRYSGDGGRT AGFSPAKRRR MTTRNQPDLT YCEIILMEME SHADAWPFLE
2360 2370 2380 2390 2400
PVNPRMVPGY RRIIKNPMDF LTMRERLLQG GYCSCEEFAA DAHLVFNNCE
2410 2420 2430
LFNEDTSEVG MAGHSMKRFF ENRWAEFYAS KDQ
Length:2,433
Mass (Da):267,844
Last modified:April 12, 2017 - v1
Checksum:i65C13AD13B2903A1
GO

Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1S3LHU9A0A1S3LHU9_SALSA
bromodomain adjacent to zinc finger...
baz2a
2,455Annotation score:
A0A1S3LHV1A0A1S3LHV1_SALSA
bromodomain adjacent to zinc finger...
baz2a
2,452Annotation score:
A0A1S3LI56A0A1S3LI56_SALSA
bromodomain adjacent to zinc finger...
baz2a
2,430Annotation score:

Sequence databases

RefSeqiXP_013990519.1, XM_014135044.1

Genome annotation databases

GeneIDi106566724

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_013990519.1, XM_014135044.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi106566724

Organism-specific databases

CTDi11176

Family and domain databases

CDDicd05503 Bromo_BAZ2A_B_like, 1 hit
Gene3Di1.20.920.10, 1 hit
3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR037374 BAZ2A/B_Bromo
IPR001487 Bromodomain
IPR036427 Bromodomain-like_sf
IPR018359 Bromodomain_CS
IPR018501 DDT_dom
IPR016177 DNA-bd_dom_sf
IPR001739 Methyl_CpG_DNA-bd
IPR028940 TIP5
IPR028941 WHIM2_dom
IPR011011 Znf_FYVE_PHD
IPR001965 Znf_PHD
IPR019787 Znf_PHD-finger
IPR013083 Znf_RING/FYVE/PHD
PANTHERiPTHR22880:SF141 PTHR22880:SF141, 1 hit
PfamiView protein in Pfam
PF00439 Bromodomain, 1 hit
PF02791 DDT, 1 hit
PF01429 MBD, 1 hit
PF00628 PHD, 1 hit
PF15613 WSD, 1 hit
PRINTSiPR00503 BROMODOMAIN
SMARTiView protein in SMART
SM00297 BROMO, 1 hit
SM00571 DDT, 1 hit
SM00391 MBD, 1 hit
SM00249 PHD, 1 hit
SUPFAMiSSF47370 SSF47370, 1 hit
SSF54171 SSF54171, 1 hit
SSF57903 SSF57903, 1 hit
PROSITEiView protein in PROSITE
PS00633 BROMODOMAIN_1, 1 hit
PS50014 BROMODOMAIN_2, 1 hit
PS50827 DDT, 1 hit
PS50982 MBD, 1 hit
PS50016 ZF_PHD_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1S3LJ20_SALSA
AccessioniPrimary (citable) accession number: A0A1S3LJ20
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: July 18, 2018
This is version 11 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again