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Protein
Submitted name:

helicase ARIP4

Gene

rad54l2

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionHelicaseImported, Hydrolase
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
helicase ARIP4Imported
Gene namesi
Name:rad54l2Imported
OrganismiSalmo salar (Atlantic salmon)Imported
Taxonomic identifieri8030 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo
Proteomesi
  • UP000087266 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini377 – 597Helicase ATP-bindingInterPro annotationAdd BLAST221
Domaini807 – 976Helicase C-terminalInterPro annotationAdd BLAST170

Phylogenomic databases

KOiK10876

Family and domain databases

CDDicd00079 HELICc, 1 hit
Gene3Di3.40.50.10810, 1 hit
InterProiView protein in InterPro
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
IPR038718 SNF2-like_sf
IPR000330 SNF2_N
PfamiView protein in Pfam
PF00271 Helicase_C, 1 hit
PF00176 SNF2_N, 1 hit
SMARTiView protein in SMART
SM00487 DEXDc, 1 hit
SM00490 HELICc, 1 hit
SUPFAMiSSF52540 SSF52540, 4 hits
PROSITEiView protein in PROSITE
PS51192 HELICASE_ATP_BIND_1, 1 hit
PS51194 HELICASE_CTER, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1S3L943-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEEAISGSD LDPSVNSEEE EEEEIEDEDN NDGDDEDDAV ERPESGQGST
60 70 80 90 100
ETETQGGRDS PSATSPSEET PSEPPSQPSS QPPSRASSRP NSRPESRSQP
110 120 130 140 150
PSGPSSQPPS RPESPSQDKP STGKKKKPRA SKSQAPSSCP ETPSKDKTSV
160 170 180 190 200
GKKKKPRTSK SKEPKLAKPS KTLHMRKNIR KLLKEHQMEA VTKAAQQEEL
210 220 230 240 250
ERLRRLEQQR KDFMAPPVQE FPPAVEAVSG RPGEEEFQGQ GSLEAAFLAR
260 270 280 290 300
QDVICLDSSD SSGEEEEDTK PPAIPTITPT IRDDVIELSS GDDDTLPISS
310 320 330 340 350
ESANEDEGAG GTEESSGAHI NDSLNQPDAQ GRVLVNINHP AEEEDLYLVP
360 370 380 390 400
QLARAVKPHQ VGGIRFLYDN LVESLERYKG SSGFGCILAH SMGLGKTLQV
410 420 430 440 450
ISFIDILLRH TEAHTVLAIV PVNTLQNWLA EFNLWLPSQE ALPPDSDPAT
460 470 480 490 500
VAGRTFRVHI LNDEHKTTVA RAKVVEDWSR DGGVLLMGYE MYRLLSLKKS
510 520 530 540 550
FVTGRKRKSK KPQGPVIIDL DEEDRQQELM KGIEKALARP GPDVVICDEG
560 570 580 590 600
HRIKNYHAST SQALKNIRSR RRVVLTGYPL QNNLIEYWCM VDFVRPDFLG
610 620 630 640 650
TRQEFSNMFE RPILNGQCVD STPQDARLMR YRSHVLHSLL EGFVQRRGHD
660 670 680 690 700
VLRDQLPSKD EHVIMVRLSP LQRALYAEFM DRFREAGNSG WLGLNPLKAF
710 720 730 740 750
CVCCKIWNHP DVLYETLQKE NLANEQDLDL DDITAAANPR CPAPGAGLKT
760 770 780 790 800
KAADSANSRS NVTLPPLNPI QERANQVITY EWAKDIMSNY QTGVLENSAK
810 820 830 840 850
MLLLFHLIDE SVIRGDKILV FSQSLSTLTV IEDFLTRRPM PAVRVSPDNH
860 870 880 890 900
GQNQTWVRNI NYYRLDGSTS ASERERLINQ FNDPENTSTW VFLLSTRAGC
910 920 930 940 950
LGVNLIGANR VVVFDASWNP CHDAQAVCRV YRYGQKKPCH IYRLVCDFTL
960 970 980 990 1000
EKKIYDRQVS KQGMSDRVVD DLNPVLTFTR KEVESLLHFA EEEPDPTKAP
1010 1020 1030 1040 1050
PQPHKEMETV ISQACQLYPH LITKEPFHHE SLLVDRKESK LTKAEKRAAK
1060 1070 1080 1090 1100
KSYEDEKRAS VPYSRPSYAH YYPTSDQTLI NIPAFNQRNW RPIARGDEKP
1110 1120 1130 1140 1150
VASVRPVQST PIPMMPRMAG MGVAGSSSGV GFPVNYLQKA GVYVQRIVTT
1160 1170 1180 1190 1200
TDIVIPGANS TTDVQARIGA GESIHMIKGS KGTYIKTNDG RIFAIRSGKL
1210 1220 1230 1240 1250
SRAVQGGTAT NRGSQVSLLH AIGNGCSSPG ERQRLTPDSA LWPSTPEILR
1260 1270 1280 1290 1300
ELSRYAVTAD TVTVGNELPS PSDTFTGDRG GGGRMQQHNQ TTESDHSRQF
1310 1320 1330 1340 1350
REDVGMSISE ALQRSKRKMA ESRGHKQGGK RSSTAAGFPG LSLGSGGLSF
1360 1370 1380 1390 1400
PPMNQALEGH MSHPLLMGGN SSSPFLQSAG QTLGDLQAMF PSAGADLLNH
1410 1420 1430 1440 1450
ASSATGSNGH LPSSTTTSTN TMPVSSASTT LPPYLMNPSV ADLLSPGFPL
1460 1470 1480 1490 1500
NYSQSLLPDP RMYPNTLGGG PASSGGSSSF LSHYPSSPSS LLGAALSRPD
1510 1520
THHMATDNGG SSSDDDVIEV TGQ
Length:1,523
Mass (Da):167,194
Last modified:April 12, 2017 - v1
Checksum:iF5F65C295F8E372E
GO

Sequence databases

RefSeqiXP_013987480.1, XM_014132005.1
XP_013987481.1, XM_014132006.1
XP_013987482.1, XM_014132007.1

Genome annotation databases

GeneIDi106565170
KEGGisasa:106565170

Similar proteinsi

Entry informationi

Entry nameiA0A1S3L943_SALSA
AccessioniPrimary (citable) accession number: A0A1S3L943
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: April 25, 2018
This is version 9 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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