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Protein
Submitted name:

ras and Rab interactor 1 isoform X1

Gene

rin1

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
ras and Rab interactor 1 isoform X1Imported
Gene namesi
Name:rin1Imported
OrganismiSalmo salar (Atlantic salmon)Imported
Taxonomic identifieri8030 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo
Proteomesi
  • UP000087266 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini75 – 169SH2InterPro annotationAdd BLAST95
Domaini565 – 708VPS9InterPro annotationAdd BLAST144

Keywords - Domaini

SH2 domainPROSITE-ProRule annotation

Family and domain databases

Gene3Di1.20.1050.80, 1 hit
3.30.505.10, 1 hit
InterProiView protein in InterPro
IPR000980 SH2
IPR036860 SH2_dom_sf
IPR003123 VPS9
IPR037191 VPS9_dom_sf
PfamiView protein in Pfam
PF00017 SH2, 1 hit
PF02204 VPS9, 1 hit
SMARTiView protein in SMART
SM00252 SH2, 1 hit
SM00167 VPS9, 1 hit
SUPFAMiSSF109993 SSF109993, 1 hit
SSF55550 SSF55550, 1 hit
PROSITEiView protein in PROSITE
PS50001 SH2, 1 hit
PS51205 VPS9, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

A0A1S3L206-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MQEDRRSRRC RAQSGTDREA RKAKDKTWKQ MQEDPVYDFP EPVGKPVGER
60 70 80 90 100
RACTQRSSLK SISVLDRLLL THPVWLQLSI NSATALHILQ REPPGTFLVR
110 120 130 140 150
RSNTSQKKVL CVRLADDYLP SFFKQFVIQE LDSTFSLERA AISFPDLCRL
160 170 180 190 200
IAFYCVSRDV LPFPLELPEA IVKASSHKQL ESISHMGVEF WSSQLNFRGP
210 220 230 240 250
RNGPPPVEEA PLPPSPTPED CATPEESPTL FQEFCSIQTR SPRELNCGAA
260 270 280 290 300
GQGALCFINP LFLQFQTTLH RRRHQFKRSL KVRVSTENSS PLSPPFAPPP
310 320 330 340 350
PPPLLAKKKS KKVHQASGAV EARVEGEGGT APVQEDSDYL QPCLVLPVLP
360 370 380 390 400
KKTRVTPTLS PTAEEDDYHV PIGLLQGLGQ EKGGEGVDLL LEQRYAPSLS
410 420 430 440 450
ELDSSSSLSS LEEAEENSER PPLTRGTSNP SPPCTSPARQ HVSALRKLSA
460 470 480 490 500
AFVSSFVPEK RVARLVEDLS RDKTTVFGVL VQDFLRQQRE VIKPQCQRSG
510 520 530 540 550
IELLQGIRLF LSQAKTFLLD CGDLQPPIET MVHDDEKDLV LEKAMFRCVL
560 570 580 590 600
KPLKGQIDGT LQTLHERDSS TQSMAESLAK ARGKTPLECF GVRVRVPDAA
610 620 630 640 650
DVEKVRQKVA LMRRAYSPID KVVLLLQVCK LIYKAMKDNS GQEFGADDFL
660 670 680 690 700
LALSYVLVQC NMPELSVEVE YMMELLESSW LKGEGGYYLT SVYASLCLIQ
710 720 730 740 750
SKPEVVPSSG LTREARDSLK DWSRRRSLQA QSQKNLRQQL RCVRVLFQDG
760 770 780 790 800
ENSWMKTLQW RAGVSEGALT QLCAAKFGVD NPELFKLYWR SEGEIKALPA
810 820 830 840
QAQIQDLQGQ GSSGTPLIYQ QANQDELKAR KLNREEAVDF MGLP
Length:844
Mass (Da):94,452
Last modified:April 12, 2017 - v1
Checksum:i9C46D8581598131A
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1S3L247A0A1S3L247_SALSA
ras and Rab interactor 1 isoform X2
rin1
816Annotation score:

Sequence databases

RefSeqiXP_013984992.1, XM_014129517.1

Genome annotation databases

GeneIDi106563703
KEGGisasa:106563703

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_013984992.1, XM_014129517.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi106563703
KEGGisasa:106563703

Organism-specific databases

CTDi9610

Family and domain databases

Gene3Di1.20.1050.80, 1 hit
3.30.505.10, 1 hit
InterProiView protein in InterPro
IPR000980 SH2
IPR036860 SH2_dom_sf
IPR003123 VPS9
IPR037191 VPS9_dom_sf
PfamiView protein in Pfam
PF00017 SH2, 1 hit
PF02204 VPS9, 1 hit
SMARTiView protein in SMART
SM00252 SH2, 1 hit
SM00167 VPS9, 1 hit
SUPFAMiSSF109993 SSF109993, 1 hit
SSF55550 SSF55550, 1 hit
PROSITEiView protein in PROSITE
PS50001 SH2, 1 hit
PS51205 VPS9, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1S3L206_SALSA
AccessioniPrimary (citable) accession number: A0A1S3L206
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: March 28, 2018
This is version 7 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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