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Protein

Protein transport protein sec16

Gene

sec16b

Organism
Salmo salar (Atlantic salmon)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus and for normal transitional endoplasmic reticulum (tER) organization.UniRule annotation

GO - Biological processi

Keywordsi

Biological processER-Golgi transportUniRule annotation, Protein transportUniRule annotation, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Protein transport protein sec16UniRule annotation
Gene namesi
Name:sec16bImported
OrganismiSalmo salar (Atlantic salmon)Imported
Taxonomic identifieri8030 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiProtacanthopterygiiSalmoniformesSalmonidaeSalmoninaeSalmo
Proteomesi
  • UP000087266 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Endoplasmic reticulumUniRule annotation, Golgi apparatusUniRule annotation, MembraneUniRule annotation

Interactioni

Subunit structurei

SEC16A and SEC16B are each present in multiple copies in a heteromeric complex.UniRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini290 – 390Sec16InterPro annotationAdd BLAST101
Domaini463 – 698Sec16_CInterPro annotationAdd BLAST236

Sequence similaritiesi

Belongs to the SEC16 family.UniRule annotation

Phylogenomic databases

KOiK20353

Family and domain databases

CDDicd09233 ACE1-Sec16-like, 1 hit
InterProiView protein in InterPro
IPR024298 ACE1_Sec16_Sec31
IPR024880 Sec16
IPR024340 Sec16_CCD
PfamiView protein in Pfam
PF12932 Sec16, 1 hit
PF12931 Sec16_C, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1S3KIQ8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDPKSHHWTK PGPGRPPQRP REREDYHRPA HPHQGTGTGH HPPAPNVGDA
60 70 80 90 100
IAGHYPPPPD PRERERQWSH QDPRYRVYLT SPPPSRPPLD FSLSSYSTPH
110 120 130 140 150
SRTAYDRPHS TMGYIRPEPQ HSRPHSRQAY DYPPQIYWDH SQDYGYYDQG
160 170 180 190 200
YYEGHYPDAG QWPPQEQWRS DQYQERRYEQ DQTGSGYPEQ QRYDQRRASS
210 220 230 240 250
QHDFRGSDED RSKANGDAGG DLPTLACCYA EGALAISKAS GLSSSSYELS
260 270 280 290 300
QYINGAEQTE PAPQTTWSIA DTEYAAIPQV TAPLKYTLPH ALVSFGPAGQ
310 320 330 340 350
LIRVSPGLAM QGDPGKVELH SLEIILGETQ EQQDMREFPG PLAREDLHKV
360 370 380 390 400
DAISFAHQKA EACMKNEKLQ DKGSAALLWN LLVLLCRQNG RIVGSDIAEL
410 420 430 440 450
LMRNSQGHGG LGGSESEAPT LIDLSEGPSP ETDPLDGADL LTGTATGVCT
460 470 480 490 500
AESTEKDMQG YTKLLLAGRK KEALELAMKS GLWGHALFLA SKMDNRSYTT
510 520 530 540 550
VLNRFTGQLA PNDPLQTLFQ MLSGRIPAVS TCCGSDKWRD WEPHLAVMLS
560 570 580 590 600
NETGDPIGHQ KSIITMGDTL ASRGLLHAAH ICYLTAYVPF GVYTAKNERL
610 620 630 640 650
VLLGNCNSLP FKEFAQNSAI RCTELFEYCQ RLGDKFFCIP PFQVYKFLYA
660 670 680 690 700
CRLLDAGLAS QAFHYCEVIG MSLLRLQEPS MVLLGELIKL AERLKQCEGM
710 720 730 740 750
GQLSDTADDR PGQEPDWLQQ LRCRQQGIQM GSSGCSDTYQ PPADRSALAH
760 770 780 790 800
EESSVYSESD TGDLSARGDD QRLDAKFLSH KAAEEQQQQH VQAQQINTQP
810 820 830 840 850
PLPVMASNTQ PAVPLVVGGQ DHSCHYTDTA QPLPQPQPSP QHPTLDCPPS
860 870 880 890 900
AREGADPFAG PGMIGVHVNA GMMPVAEYGQ HYGQESGYGD QQAWQQGGHQ
910 920 930 940 950
ATITQEGKAS EPDRIQPKQS TKSGWFSGWF KHKPKEEQSE ASQDADSADP
960 970 980 990
VLTMEMPPTS LFSFPPTTNI PAANFPTQPA STGINAFSRK VGE
Length:993
Mass (Da):109,637
Last modified:April 12, 2017 - v1
Checksum:i50A4E6BC267B403D
GO

Sequence databases

RefSeqiXP_013978611.1, XM_014123136.1

Genome annotation databases

GeneIDi106560327
KEGGisasa:106560327

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_013978611.1, XM_014123136.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi106560327
KEGGisasa:106560327

Organism-specific databases

CTDi89866

Phylogenomic databases

KOiK20353

Family and domain databases

CDDicd09233 ACE1-Sec16-like, 1 hit
InterProiView protein in InterPro
IPR024298 ACE1_Sec16_Sec31
IPR024880 Sec16
IPR024340 Sec16_CCD
PfamiView protein in Pfam
PF12932 Sec16, 1 hit
PF12931 Sec16_C, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1S3KIQ8_SALSA
AccessioniPrimary (citable) accession number: A0A1S3KIQ8
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: February 28, 2018
This is version 7 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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