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UniProtKB - A0A1S3KGS0 (A0A1S3KGS0_LINUN)

Entry version 16 (10 Feb 2021)
Sequence version 1 (12 Apr 2017)
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Protein
Submitted name:

zinc finger protein 474-like

Gene

LOC106181734

Organism
Lingula unguis
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
zinc finger protein 474-likeImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:LOC106181734Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiLingula unguisImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri7574 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Spiralia › Lophotrochozoa › Brachiopoda › Linguliformea › Lingulata › Lingulida › Linguloidea › Lingulidae › Lingula
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000085678 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Genome assembly

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni40 – 66DisorderedSequence analysisAdd BLAST27
Regioni99 – 247DisorderedSequence analysisAdd BLAST149
Regioni282 – 311DisorderedSequence analysisAdd BLAST30
Regioni339 – 396DisorderedSequence analysisAdd BLAST58
Regioni435 – 457DisorderedSequence analysisAdd BLAST23
Regioni489 – 533DisorderedSequence analysisAdd BLAST45

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi103 – 130PolarSequence analysisAdd BLAST28
Compositional biasi149 – 225PolarSequence analysisAdd BLAST77
Compositional biasi294 – 311PolarSequence analysisAdd BLAST18
Compositional biasi339 – 360PolarSequence analysisAdd BLAST22
Compositional biasi378 – 396PolarSequence analysisAdd BLAST19
Compositional biasi512 – 526PolarSequence analysisAdd BLAST15

Phylogenomic databases

Identification of Orthologs from Complete Genome Data

More...OMAi		EDCCIDR

Database of Orthologous Groups

More...OrthoDBi		778172at2759

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR026319, ZC2HC1

The PANTHER Classification System

More...PANTHERi		PTHR13555, PTHR13555, 4 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A1S3KGS0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSGRPPAVVC YICGREFGTR SISIHEPQCL KKWNLENQQL PKHQRRPPPQ 
        60         70         80         90        100
KPQVLPAIGH GNKGYDLDRF NEQAYQSAQN NLAECENCGR TFLPDRLPVH 
       110        120        130        140        150
QRSCRPGNSQ KPRSTLPSHS RSQTWPEDTG QPRPMSGGHL GLSPRPPQKP 
       160        170        180        190        200
TGSGMQGSSS VQRPRTSTLK NPKILKGNSF GEETASSPSS TGTPPGMNKF 
       210        220        230        240        250
SHTSGGGKRL TMNNGTQQTR RDNQPKSAGV PRDGGTDPST GPHRGGPRTL 
       260        270        280        290        300
VCYICGREFG SKSLSIHEPQ CLEKWKAEND KLPRELRRPL PQKPGTSGNM 
       310        320        330        340        350
NEQNEAARQN AQSNLAECPN CGRTFQPDRL LIHQRSCKPK TNTAATGTGQ 
       360        370        380        390        400
NKNSVRANRN LAPMNGLDRG ATFTAEPSSG GGGPSTVTNG HRDNSPSRAP 
       410        420        430        440        450
KTLICYVCGR EFGSKSLPIH EPQCLEKWKR ENAKLPNNQK KQLPQKPQAG 
       460        470        480        490        500
SAGATREEMN DAAYKSAQSN LVPCENCGRT FQPDRLPVHQ RACRPKTGTR 
       510        520        530        540        550
TPVHMKTAKL GPVTSRGSTQ NSERPKSKPP AMRRPPTVIC YICGREYGSK 
       560        570        580        590        600
SISIHEPQCL QKWHMENNQL PKHLRRPVPK KPEVRPVTGK GTYDIDAMNE 
       610        620        630        640 
AAWESAQANL VPCDICGRTF LPDRLLVHKR SCKPKTPKAP RN
Length:642
Mass (Da):70,663
Last modified:April 12, 2017 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iD5A26C99648B803B
GO

Sequence databases

NCBI Reference Sequences

More...RefSeqi		XP_013421654.1, XM_013566200.1

Genome annotation databases

Ensembl metazoan genome annotation project

More...EnsemblMetazoai		g5003.t1; g5003.t1; g5003

Database of genes from NCBI RefSeq genomes

More...GeneIDi		106181734

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		lak:106181734

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

RefSeqiXP_013421654.1, XM_013566200.1

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Genome annotation databases

EnsemblMetazoaig5003.t1; g5003.t1; g5003
GeneIDi106181734
KEGGilak:106181734

Phylogenomic databases

OMAiEDCCIDR
OrthoDBi778172at2759

Family and domain databases

InterProiView protein in InterPro
IPR026319, ZC2HC1
PANTHERiPTHR13555, PTHR13555, 4 hits

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A1S3KGS0_LINUN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A1S3KGS0
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: February 10, 2021
This is version 16 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Reference proteomeImported
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Main funding by: National Institutes of Health

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