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UniProtKB - A0A1S3KD55 (A0A1S3KD55_LINUN)

Entry version 15 (10 Feb 2021)
Sequence version 1 (12 Apr 2017)
Previous versions | rss
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Protein
Submitted name:

uncharacterized protein LOC106180931

Gene

LOC106180931

Organism
Lingula unguis
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
uncharacterized protein LOC106180931Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:LOC106180931Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiLingula unguisImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri7574 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Spiralia › Lophotrochozoa › Brachiopoda › Linguliformea › Lingulata › Lingulida › Linguloidea › Lingulidae › Lingula
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000085678 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Genome assembly

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Cytoplasm, CytoskeletonARBA annotation

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini2542 – 2668ALMS_motifInterPro annotationAdd BLAST127

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 100DisorderedSequence analysisAdd BLAST100
Regioni131 – 298DisorderedSequence analysisAdd BLAST168
Regioni399 – 474DisorderedSequence analysisAdd BLAST76
Regioni489 – 797DisorderedSequence analysisAdd BLAST309
Regioni812 – 877DisorderedSequence analysisAdd BLAST66
Regioni984 – 1016DisorderedSequence analysisAdd BLAST33
Regioni1046 – 1080DisorderedSequence analysisAdd BLAST35
Regioni1160 – 1208DisorderedSequence analysisAdd BLAST49
Regioni1338 – 1602DisorderedSequence analysisAdd BLAST265
Regioni1645 – 1666DisorderedSequence analysisAdd BLAST22
Regioni1688 – 1810DisorderedSequence analysisAdd BLAST123
Regioni1824 – 1931DisorderedSequence analysisAdd BLAST108
Regioni1946 – 1966DisorderedSequence analysisAdd BLAST21
Regioni2001 – 2055DisorderedSequence analysisAdd BLAST55
Regioni2143 – 2217DisorderedSequence analysisAdd BLAST75
Regioni2269 – 2290DisorderedSequence analysisAdd BLAST22
Regioni2302 – 2377DisorderedSequence analysisAdd BLAST76
Regioni2392 – 2462DisorderedSequence analysisAdd BLAST71
Regioni2475 – 2514DisorderedSequence analysisAdd BLAST40

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili943 – 970Sequence analysisAdd BLAST28
Coiled coili1127 – 1158Sequence analysisAdd BLAST32
Coiled coili2109 – 2129Sequence analysisAdd BLAST21

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi16 – 47PolarSequence analysisAdd BLAST32
Compositional biasi57 – 71PolyampholyteSequence analysisAdd BLAST15
Compositional biasi72 – 86PolarSequence analysisAdd BLAST15
Compositional biasi158 – 191PolarSequence analysisAdd BLAST34
Compositional biasi208 – 222PolyampholyteSequence analysisAdd BLAST15
Compositional biasi239 – 262PolyampholyteSequence analysisAdd BLAST24
Compositional biasi409 – 426PolarSequence analysisAdd BLAST18
Compositional biasi489 – 519PolarSequence analysisAdd BLAST31
Compositional biasi559 – 577PolyampholyteSequence analysisAdd BLAST19
Compositional biasi579 – 637PolarSequence analysisAdd BLAST59
Compositional biasi641 – 657PolyampholyteSequence analysisAdd BLAST17
Compositional biasi665 – 700PolarSequence analysisAdd BLAST36
Compositional biasi756 – 775PolarSequence analysisAdd BLAST20
Compositional biasi819 – 845PolarSequence analysisAdd BLAST27
Compositional biasi984 – 1002PolyampholyteSequence analysisAdd BLAST19
Compositional biasi1050 – 1074PolarSequence analysisAdd BLAST25
Compositional biasi1175 – 1196PolyampholyteSequence analysisAdd BLAST22
Compositional biasi1344 – 1363PolyampholyteSequence analysisAdd BLAST20
Compositional biasi1422 – 1437PolyampholyteSequence analysisAdd BLAST16
Compositional biasi1465 – 1486PolyampholyteSequence analysisAdd BLAST22
Compositional biasi1487 – 1511PolarSequence analysisAdd BLAST25
Compositional biasi1540 – 1565PolyampholyteSequence analysisAdd BLAST26
Compositional biasi1751 – 1765PolyampholyteSequence analysisAdd BLAST15
Compositional biasi1767 – 1795PolarSequence analysisAdd BLAST29
Compositional biasi1796 – 1810PolyampholyteSequence analysisAdd BLAST15
Compositional biasi1878 – 1893PolyampholyteSequence analysisAdd BLAST16
Compositional biasi1894 – 1931PolarSequence analysisAdd BLAST38
Compositional biasi2001 – 2047PolyampholyteSequence analysisAdd BLAST47
Compositional biasi2154 – 2217PolarSequence analysisAdd BLAST64
Compositional biasi2349 – 2364PolarSequence analysisAdd BLAST16
Compositional biasi2412 – 2426PolarSequence analysisAdd BLAST15
Compositional biasi2487 – 2503PolarSequence analysisAdd BLAST17

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

Database of Orthologous Groups

More...OrthoDBi		824330at2759

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR029299, ALMS_motif

Pfam protein domain database

More...Pfami		View protein in Pfam
PF15309, ALMS_motif, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A1S3KD55-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MESEPEWGEL AGVTASTADS ILQESLPDQT GLVSVPTLSQ HALSPESGGE 
        60         70         80         90        100
YNDSFKIGPV DFHDSREEDH FQLSPTYSSG TTVEERKQNT KTSDSLSQHP 
       110        120        130        140        150
LEEMAAAEFV GSEVKNLIAE VSSDFISGRF SLSQQPVSDE ESTPRESGDG 
       160        170        180        190        200
GNEQDDYQAL SGRYSQRSES DSSWRSSGTF HTGSNGEGNL QHLLPQIGPQ 
       210        220        230        240        250
IDVIGTRGKV EEPFENEGLL KEPEPNKSTV VKAVEGENQL RNVHSEDSDH 
       260        270        280        290        300
GSQEEPPVKH PRLAGEEQAN VSVLPNMYLQ ASPPQEEPPQ PNHGLEEDSV 
       310        320        330        340        350
AFSHSRYPFS MISDSLVFTE QKPISQSTPY VVGLVDPIAQ IKSPPKTSGV 
       360        370        380        390        400
ELKKYSQGLT TGGSGILSIG TTNPARAGQI PLRADHDIGL PIAVVEQEKP 
       410        420        430        440        450
LSKGTGPQKR VSWGVSSDNS GRIDQSEGAA SAEAIDEDGD QMRIISRQDT 
       460        470        480        490        500
VHSDVADGGF TSSKDAPDNM SKSDVKPLAS YIYYPAELRS GSVNTTDATS 
       510        520        530        540        550
KRSCSSQSSL STSESVEKKS TSSESSDVSE VIRSAGVDYI SVEERDQLLS 
       560        570        580        590        600
ASSSRSSKTS EIETERSRSK EGRSPVPHTS ELPDSQETIT SVVSDQLTLP 
       610        620        630        640        650
PSQETLSQPL SQPLSQPATQ GLSQPSSGST QSQDSLARRV ELLLRGADFE 
       660        670        680        690        700
MEDPYGEEVV KSLPLSTASA PSTVRSSPPA TSKSDGVKGE TNNGKGTLDD 
       710        720        730        740        750
ITNFGQAARV HAKKHGPSPV ADVISPRSTT STVYDELPHP RLSGSLGERG 
       760        770        780        790        800
FSALRPGSSR SDNSSVSTKS VLMEKARKTN MSPKDLPPYG PSDRVSDPLS 
       810        820        830        840        850
VRIQSILQGA EFSHGEAHSS PISYGSLSHS VSLPMGSGIS EDTTGPTDVT 
       860        870        880        890        900
KDRKSNEKSN FNASRGLAAE TFQDDPVPRQ MVGLQRTSSM QSVQSTDSLS 
       910        920        930        940        950
NRVQAILSNT KHLDGEAAPV DLPLSQDLLT QIPLTQVPVP QQYLSQEVDY 
       960        970        980        990       1000
EVLEQELNDI QQQLQQSHQD EEDLYDKYIR PHMSPEEQST QHEEEPTEKS 
      1010       1020       1030       1040       1050
KDSSQESSSG LAGAPRSKKL LWDYGADLGY DEGDGRFLGT LKEVSLPDSQ 
      1060       1070       1080       1090       1100
LPGSYASFNR SEPEGTSSMR ADVKNPASGD NYERVVHDAV ITEEGEILAT 
      1110       1120       1130       1140       1150
GAITSQKDDH YGSTDSLARR VGVLLGAESP QKQVQQILQE VEEEEEQLLS 
      1160       1170       1180       1190       1200
QNKAEMARSY IQYPSDLKSA TPGDSEIRGG RKDEESSEKS ETSRSESLLE 
      1210       1220       1230       1240       1250
SDNQQIPTQI PVYSLSEGGN GLSQLSSGPL SQQSDFTLTP MAAGPFTAFN 
      1260       1270       1280       1290       1300
TATTLLAAQL EKAARQRFDK SLMQTPSQKN MSPGDHLGIH AYRDELFEDE 
      1310       1320       1330       1340       1350
SFLQNSPSDA EKFITEKAAK AMIRQAFQAP VVPRLYTDNR IQQQENRDFG 
      1360       1370       1380       1390       1400
KVQRRDLEKR QISDRQSNIG SVDNRSYIEY PPDLRSKTPQ GGRRSEPSYS 
      1410       1420       1430       1440       1450
GHRSEAGYAP IPSVVTAQDK KAGNKDQIRR LVHVGDGIEH QQRAQSDPLR 
      1460       1470       1480       1490       1500
EQTMKAMSPV PNRHSAEGHS ERRRTAWEEE QSGDHRAFSQ RATSQLKTSA 
      1510       1520       1530       1540       1550
RGSSSLGSVR QEQMQDDKRF MRSASPLQSR KPVVQSKVSD GCDLKRKSNE 
      1560       1570       1580       1590       1600
MTTGSRGHDV RARIRTPSPV SRNVHRTRST SPEPKENGHR MGRMSPVYTG 
      1610       1620       1630       1640       1650
GKRIPNVERH FELAVRPVER QHVRTGGDFH RRSWSPTLGQ QMRFSVGDAS 
      1660       1670       1680       1690       1700
RRSRSTSPAL RPYRPHGSEE LYYVESGVED SGLSVAHSET TLESTHTGSD 
      1710       1720       1730       1740       1750
DALGPSLPPH LLGSRKDVAP KHARGIYGNR ISPKSRSPSP SPGPVLGTID 
      1760       1770       1780       1790       1800
ERDTVVHRGE EKSTRIVTGR PTAQQDGQVD GHQGDNQPGD SRHNSRPLQR 
      1810       1820       1830       1840       1850
SLHKEDVLDA RDYHKLPARS FIDYPSDLKS KTPSSERGGS GVPVDSRYHG 
      1860       1870       1880       1890       1900
RRTLSPVETR DGGRGDALTP LLAEEDSEAD ISSDKHIEGH MQDKSSAQEI 
      1910       1920       1930       1940       1950
QSVGGSEVNK NKSALQHLQE ALDSESDMSD MPSNLQEMWQ RFKEITGEAK 
      1960       1970       1980       1990       2000
QRGPQKKSEF SSLLKNPVQH MVKKMCAEKE GRAKEVKKTG DMIDSVISSN 
      2010       2020       2030       2040       2050
YELEKKRNVP RKAKEKTLEK GKTFDQQKDD QIQQGHKMEK DKPVSRPSPS 
      2060       2070       2080       2090       2100
RVDFLPGDQL VSVFNETDET IQSVPEDTTV DALSSKVVTG EVDEKLYRIY 
      2110       2120       2130       2140       2150
DPKRVDPRMV KLQRKIERQK QKFIRHQERE KKRKDKIEQW EKTLKERDSE 
      2160       2170       2180       2190       2200
KQSINTDSMS SISTTSSTVN GSTWSNESSL MSSTSSESRE VTATKSTTLT 
      2210       2220       2230       2240       2250
PVPESELESY TPSPMPSQKT AAVLRKQKPP DVQRTVNLPS TQYEEVSDST 
      2260       2270       2280       2290       2300
TDTDHSVCGC KDAHVRQKRK SVAKEEKDRQ MIGKKEKPLK EVYGPQSAYI 
      2310       2320       2330       2340       2350
EFKKPEHAAP KAKVKEKGKK FKQNHPPGND TSVDRTGQAK KAVKAESTPL 
      2360       2370       2380       2390       2400
KVDTSTQKTT RDVGTIFPSP MLPSPPIKRK YRADVSMVSA AVQTTPRVSG 
      2410       2420       2430       2440       2450
APSEHREYTA EKGGSSSNQR SFVTVPVSSP KPKDKPAVRS SKIFSPETPP 
      2460       2470       2480       2490       2500
TSAKPDKLRH SPGLAWYIPM KETKPKPWRR PLQEKQSVQE NKQLQFSSHF 
      2510       2520       2530       2540       2550
RSKENQDPVL KDTGSKVDMY LSRKSDRVNV LNNGEKIKPS EKLTLQEAFV 
      2560       2570       2580       2590       2600
LFKGEAISRS RERQRRIVLA AEERKVQEQH NRERLHLFAD QRRKHANPNA 
      2610       2620       2630       2640       2650
HPYSEQLHQP KQRVMTKSEM REHSLKIYQK LPEVIQKIEE KKRQEKYKTN 
      2660       2670 
RIRAQLFKEK VLNKVLKNKG PWLPNP
Length:2,676
Mass (Da):295,871
Last modified:April 12, 2017 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i6D874D7FC82B2243
GO

Sequence databases

NCBI Reference Sequences

More...RefSeqi		XP_013420558.1, XM_013565104.1

Genome annotation databases

Database of genes from NCBI RefSeq genomes

More...GeneIDi		106180931

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		lak:106180931

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

RefSeqiXP_013420558.1, XM_013565104.1

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Genome annotation databases

GeneIDi106180931
KEGGilak:106180931

Phylogenomic databases

OrthoDBi824330at2759

Family and domain databases

InterProiView protein in InterPro
IPR029299, ALMS_motif
PfamiView protein in Pfam
PF15309, ALMS_motif, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A1S3KD55_LINUN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A1S3KD55
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: February 10, 2021
This is version 15 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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Main funding by: National Institutes of Health

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