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UniProtKB - A0A1S3K594 (A0A1S3K594_LINUN)

Entry version 11 (10 Feb 2021)
Sequence version 1 (12 Apr 2017)
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Protein
Submitted name:

IQ domain-containing protein H-like isoform X1

Gene

LOC106178692

Organism
Lingula unguis
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
IQ domain-containing protein H-like isoform X1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:LOC106178692Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiLingula unguisImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri7574 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Spiralia › Lophotrochozoa › Brachiopoda › Linguliformea › Lingulata › Lingulida › Linguloidea › Lingulidae › Lingula
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000085678 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Genome assembly

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni255 – 276DisorderedSequence analysisAdd BLAST22
Regioni295 – 323DisorderedSequence analysisAdd BLAST29
Regioni979 – 1003DisorderedSequence analysisAdd BLAST25
Regioni1116 – 1139DisorderedSequence analysisAdd BLAST24

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi982 – 1002PolyampholyteSequence analysisAdd BLAST21

Phylogenomic databases

Database of Orthologous Groups

More...OrthoDBi		203701at2759

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR000048, IQ_motif_EF-hand-BS
IPR038752, IQCH

The PANTHER Classification System

More...PANTHERi		PTHR14465, PTHR14465, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS50096, IQ, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

A0A1S3K594-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPIMADVNNH PEEVGQILVK VQEDLHQLKH KLLTQAQNGT IDLTALENAI 
        60         70         80         90        100
NKTEHDLKVR SEQVVGEINQ QFSTLPSLEA QLQQREQSYT GPVVESTWDL 
       110        120        130        140        150
QRGDEIRRPG SRTLIETRGM DTQPVLTLGR KTPRYQLTGA TPGQKLKQVW 
       160        170        180        190        200
SMRVAQNPHN PQNRTVMQDN FGVQLPQLED RKSATPSSAK IVKGNTVEHL 
       210        220        230        240        250
TVLPKANRVD PQLIPPAISE DDAKHGILSL IERGLIPPAA ELTLDPSPVH 
       260        270        280        290        300
HRMAPLHDPM EKSGEKAKPS PMSDGSFNLA SIKLDTNFKA TESTVSSVVR 
       310        320        330        340        350
GIRPSPPTHG KHRKGTEQPS KTPVMAKKFE MPLQPMPERP ATNAVIMELL 
       360        370        380        390        400
EQTAVTPIGQ VPPPTTPASG DFKASNYRFA MQHGKVRDTA PDFLAFKQHY 
       410        420        430        440        450
CLSWGAIVSM FKHLERMLTE YAVPVAFIHG DRLADLSLEY ELDSQPTLDD 
       460        470        480        490        500
LLSVIINKED VESILKRPGR RYLGPDGEFA AATKIQATWK RFRDRRKYLE 
       510        520        530        540        550
YRRLKWASGV IAITWVMNVK MSQVRKQLKR TRIAELEGFR KRAKLLSTQW 
       560        570        580        590        600
NRMKHSKRVI IHVPSLGYNQ PIRDSIKDFG IRQNAQMGRL CDLKDPNVDV 
       610        620        630        640        650
IYISPVPVND ETVQYYTKLL GLKSAIDSGD VDKQGDMTDR YKIIVPEAIK 
       660        670        680        690        700
SFPTHRMCLA THLKYSPRAL RRIKNLIRGR DAYIVPGMPH KDDLSVAHIL 
       710        720        730        740        750
NIPLLCTEPE IAHLYTSKSG AKRIFQSANV AIPPSEFDVY SLPQLHESLA 
       760        770        780        790        800
QLVTDNLEVK TWVLKIDDEF DGRGIAYCNV TTYLESHQWA LKEAKRYGDK 
       810        820        830        840        850
WSKKWAQEQV FMKIQSEIPD ILEHWCFPVD SKVYPTWPAF LDAFLAKGGI 
       860        870        880        890        900
IEARPPAEDI TALTADMLLE PNGKISIVSL GDQIHAETPY KCWGLSVPQS 
       910        920        930        940        950
SVEPAQLNDA CMRIAEACKA RGVVGYFTID FVTFIDPKTD DQVLWAVDLS 
       960        970        980        990       1000
LSYSDSTTMN NLLQFVAGGK LDINTHIYNI PPPKKEPKKR RPKGREEEEV 
      1010       1020       1030       1040       1050
PPNTNRFAVM STQLVHSNLA VVHYSVFFQM CRAHGIGFDI KEKQGSIFTL 
      1060       1070       1080       1090       1100
IDSFNRENLG MITVGDNLQG TLGAFARNLS VIHQEISAPN MQGESNFKAV 
      1110       1120       1130 
IQDIESILGT TVLNADEQTR HEDQEDSSSQ QGTHSQTQS
Length:1,139
Mass (Da):128,030
Last modified:April 12, 2017 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i21CB1B74366AFAD7
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1S3K475A0A1S3K475_LINUN
IQ domain-containing protein H-like...
LOC106178692
1,129Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

NCBI Reference Sequences

More...RefSeqi		XP_013417436.1, XM_013561982.1

Genome annotation databases

Database of genes from NCBI RefSeq genomes

More...GeneIDi		106178692

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		lak:106178692

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

RefSeqiXP_013417436.1, XM_013561982.1

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Genome annotation databases

GeneIDi106178692
KEGGilak:106178692

Phylogenomic databases

OrthoDBi203701at2759

Family and domain databases

InterProiView protein in InterPro
IPR000048, IQ_motif_EF-hand-BS
IPR038752, IQCH
PANTHERiPTHR14465, PTHR14465, 1 hit
PROSITEiView protein in PROSITE
PS50096, IQ, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A1S3K594_LINUN
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A1S3K594
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: February 10, 2021
This is version 11 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Reference proteomeImported
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