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Protein
Submitted name:

keratin, type II cytoskeletal 5 isoform X1

Gene

Krt5

Organism
Dipodomys ordii (Ord's kangaroo rat)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
keratin, type II cytoskeletal 5 isoform X1Imported
Gene namesi
Name:Krt5Imported
OrganismiDipodomys ordii (Ord's kangaroo rat)Imported
Taxonomic identifieri10020 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaCastorimorphaHeteromyidaeDipodomyinaeDipodomys
Proteomesi
  • UP000081671 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Intermediate filamentPROSITE-ProRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini175 – 488IF rodInterPro annotationAdd BLAST314

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili179 – 199Sequence analysisAdd BLAST21
Coiled coili244 – 278Sequence analysisAdd BLAST35
Coiled coili286 – 306Sequence analysisAdd BLAST21
Coiled coili386 – 466Sequence analysisAdd BLAST81

Sequence similaritiesi

Belongs to the intermediate filament family.PROSITE-ProRule annotationSAAS annotation

Keywords - Domaini

Coiled coilPROSITE-ProRule annotationSAAS annotation

Family and domain databases

InterProiView protein in InterPro
IPR001664 IF
IPR018039 IF_conserved
IPR039008 IF_rod_dom
IPR032444 Keratin_2_head
IPR003054 Keratin_II
PANTHERiPTHR23239 PTHR23239, 1 hit
PfamiView protein in Pfam
PF00038 Filament, 1 hit
PF16208 Keratin_2_head, 1 hit
PRINTSiPR01276 TYPE2KERATIN
SMARTiView protein in SMART
SM01391 Filament, 1 hit
PROSITEiView protein in PROSITE
PS00226 IF_ROD_1, 1 hit
PS51842 IF_ROD_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1S3GGQ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRQSSVSFR SGGSRSFSAA SAITPSVSRT SFTSVSRSGG GGGGSRISFG
60 70 80 90 100
GVSGLGSYGS RSLYNVGSSK RISINSGGGA FRGRSIGGAG AGYGFGSGAG
110 120 130 140 150
GGFGFGGGSF GLGGGGGAGF GGGAGFGGGY GGGFGGPGFP VCPPGGIQEV
160 170 180 190 200
TINQSLLTPL NLEIDPTIQR VRTEEREQIK TLNNKFASFI DKVRFLEQQN
210 220 230 240 250
KVLDTKWTLL QEQGTKTVRQ NLEPLFEQYI NNLRRQLDGV LGERGRLDSE
260 270 280 290 300
LRNMQDLVED FKNKYEDEIN KRTTAENEFV MLKKDVDAAY MNKVELEAKV
310 320 330 340 350
DALMDEINFL KMFFDAELSQ MQTHISDTSV VLSMDNNRSL DLDSIIAEVK
360 370 380 390 400
AQYEDIANRS RTEAESWYQT KYEELQQTAG RHGDDLRNTK HEISEMNRMI
410 420 430 440 450
QRLRAEIDNV KKQCANLQNA IADAEQRGEL ALKDARNKLT ELEEALQKAK
460 470 480 490 500
QDMARLMRDY QELMNVKLAL DVEIATYRKL LEGEECRLSG EGVGPVNISV
510 520 530 540 550
VTNSLSSGYG GSSFGGGYGG GIGGGIGGGY GGGIGGGIGG GGGSGSYYSS
560 570 580 590 600
SSGGMGGGGG LGGGLSVGGS GFSASSGRGI GGGSSSSVKF VSTTSSSRRS

FKS
Length:603
Mass (Da):63,345
Last modified:April 12, 2017 - v1
Checksum:i19CE0AEC9F162E76
GO

Sequence databases

RefSeqiXP_012887890.1, XM_013032436.1

Genome annotation databases

GeneIDi105997891

Similar proteinsi

Entry informationi

Entry nameiA0A1S3GGQ0_DIPOR
AccessioniPrimary (citable) accession number: A0A1S3GGQ0
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: June 20, 2018
This is version 8 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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