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Protein
Submitted name:

heterogeneous nuclear ribonucleoprotein A/B isoform X1

Gene

Hnrnpab

Organism
Dipodomys ordii (Ord's kangaroo rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRibonucleoproteinImported, RNA-bindingPROSITE-ProRule annotation, Viral nucleoproteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
heterogeneous nuclear ribonucleoprotein A/B isoform X1Imported
Gene namesi
Name:HnrnpabImported
OrganismiDipodomys ordii (Ord's kangaroo rat)Imported
Taxonomic identifieri10020 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaCastorimorphaHeteromyidaeDipodomyinaeDipodomys
Proteomesi
  • UP000081671 Componenti: Genome assembly

Subcellular locationi

    Keywords - Cellular componenti

    Virion

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    Domaini73 – 158RRMInterPro annotationAdd BLAST86
    Domaini157 – 236RRMInterPro annotationAdd BLAST80

    Family and domain databases

    CDDicd12757 RRM1_hnRNPAB, 1 hit
    Gene3Di3.30.70.330, 2 hits
    InterProiView protein in InterPro
    IPR012956 CARG-binding_factor_N
    IPR034846 hnRNPAB_RRM1
    IPR012677 Nucleotide-bd_a/b_plait_sf
    IPR035979 RBD_domain_sf
    IPR000504 RRM_dom
    PfamiView protein in Pfam
    PF08143 CBFNT, 1 hit
    PF00076 RRM_1, 2 hits
    SMARTiView protein in SMART
    SM00360 RRM, 2 hits
    SUPFAMiSSF54928 SSF54928, 2 hits
    PROSITEiView protein in PROSITE
    PS50102 RRM, 2 hits

    Sequencei

    Sequence statusi: Complete.

    A0A1S3GC46-1 [UniParc]FASTAAdd to basket

    « Hide

            10         20         30         40         50
    MSEAGEEQPM ETTAATENGH EAAPEGESPS SGGAGPEAAA AGSGGGAAAA
    60 70 80 90 100
    PSGNQNGAEG DQINASKNEE DAGKMFVGGL SWDTSKKDLK DYFTKFGEVV
    110 120 130 140 150
    DCTIKMDPNT GRSRGFGFIL FKDAASVEKV LDQKEHRLDG RVIDPKKAMA
    160 170 180 190 200
    MKKDPVKKIF VGGLNPEATE EKIREYFGEF GKIEAVELPM DPKLNKRRGF
    210 220 230 240 250
    VFITFKEEDP VKKVLEKKFH TISGSKCEIK VAQPKEVYQQ QQYGSGGRGN
    260 270 280 290 300
    RNRGNRGSGG GQSQSWNQGY GNYWNQGYGY QQGYAGSYGP SYGGYDYSPY
    310 320 330
    GYYGYGPGYD YSQGSTNYGK SQRRGGHQNN YKPY
    Length:334
    Mass (Da):36,307
    Last modified:April 12, 2017 - v1
    Checksum:i1475355ED4C4181E
    GO

    Sequence databases

    RefSeqiXP_012886408.1, XM_013030954.1
    XP_012886410.1, XM_013030956.1

    Genome annotation databases

    GeneIDi105996767

    Similar proteinsi

    Entry informationi

    Entry nameiA0A1S3GC46_DIPOR
    AccessioniPrimary (citable) accession number: A0A1S3GC46
    Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
    Last sequence update: April 12, 2017
    Last modified: May 23, 2018
    This is version 10 of the entry and version 1 of the sequence. See complete history.
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

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