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Protein
Submitted name:

DNA-directed RNA polymerase I subunit RPA43

Gene

Twistnb

Organism
Dipodomys ordii (Ord's kangaroo rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription

Names & Taxonomyi

Protein namesi
Submitted name:
DNA-directed RNA polymerase I subunit RPA43Imported
Gene namesi
Name:TwistnbImported
OrganismiDipodomys ordii (Ord's kangaroo rat)Imported
Taxonomic identifieri10020 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaCastorimorphaHeteromyidaeDipodomyinaeDipodomys
Proteomesi
  • UP000081671 Componenti: Genome assembly

Subcellular locationi

    Keywords - Cellular componenti

    DNA-directed RNA polymeraseImported

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    Domaini55 – 123SHS2_Rpb7-NInterPro annotationAdd BLAST69

    Family and domain databases

    Gene3Di3.30.1490.120, 1 hit
    InterProiView protein in InterPro
    IPR036898 RNA_pol_Rpb7-like_N_sf
    IPR005576 RNA_pol_Rpb7_N
    PfamiView protein in Pfam
    PF03876 SHS2_Rpb7-N, 1 hit

    Sequencei

    Sequence statusi: Complete.

    A0A1S3FUJ6-1 [UniParc]FASTAAdd to basket
    « Hide
            10         20         30         40         50
    MAAGGLEPPG PKAASEGRGV GSAGIVPCLE LPTYAAASAL VGSRYSCLVA
    60 70 80 90 100
    GPHRRHVALS PRYLHRKRTG IREQLDAELL RYSESLLGVP IAYDNIKVVG
    110 120 130 140 150
    ELGDIYDDQG HIHLDIEADF VIFCPGPGQK LMGTVNKVSS SHIGCLVHRC
    160 170 180 190 200
    FNASIPKPEQ MSSEQWQTLE INVGDELEFE VFRLDSDAAG VFCIRGKLNM
    210 220 230 240 250
    TSLQSKCSKV SEEMSETRTE ETIEKISKKK KKKKKDPETY EADGTTSELA
    260 270 280 290 300
    DSAHSTVKEE IEDVQISCNM ESLQEEEPKM KKKKKKKYQE DQDPVFHGSD
    310
    SSGYQSDHKK KKKKRKQ
    Length:317
    Mass (Da):35,157
    Last modified:April 12, 2017 - v1
    Checksum:iFDED64675C40A62A
    GO

    Sequence databases

    RefSeqiXP_012879522.1, XM_013024068.1

    Genome annotation databases

    GeneIDi105991417

    Similar proteinsi

    Cross-referencesi

    Sequence databases

    RefSeqiXP_012879522.1, XM_013024068.1

    3D structure databases

    ModBaseiSearch...
    MobiDBiSearch...

    Protocols and materials databases

    Structural Biology KnowledgebaseSearch...

    Genome annotation databases

    GeneIDi105991417

    Organism-specific databases

    CTDi221830

    Family and domain databases

    Gene3Di3.30.1490.120, 1 hit
    InterProiView protein in InterPro
    IPR036898 RNA_pol_Rpb7-like_N_sf
    IPR005576 RNA_pol_Rpb7_N
    PfamiView protein in Pfam
    PF03876 SHS2_Rpb7-N, 1 hit
    ProtoNetiSearch...

    Entry informationi

    Entry nameiA0A1S3FUJ6_DIPOR
    AccessioniPrimary (citable) accession number: A0A1S3FUJ6
    Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
    Last sequence update: April 12, 2017
    Last modified: February 28, 2018
    This is version 5 of the entry and version 1 of the sequence. See complete history.
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported
    UniProt is an ELIXIR core data resource
    Main funding by: National Institutes of Health

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