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Protein
Submitted name:

integrin beta-like protein 1 isoform X2

Gene

Itgbl1

Organism
Dipodomys ordii (Ord's kangaroo rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Keywordsi

Molecular functionIntegrinImported

Names & Taxonomyi

Protein namesi
Submitted name:
integrin beta-like protein 1 isoform X2Imported
Gene namesi
Name:Itgbl1Imported
OrganismiDipodomys ordii (Ord's kangaroo rat)Imported
Taxonomic identifieri10020 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaCastorimorphaHeteromyidaeDipodomyinaeDipodomys
Proteomesi
  • UP000081671 Componenti: Genome assembly

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_501034972924 – 445Sequence analysisAdd BLAST422

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini136 – 167EGF_2InterPro annotationAdd BLAST32
Domaini236 – 261EGF_2InterPro annotationAdd BLAST26
Domaini319 – 349EGF_2InterPro annotationAdd BLAST31

Keywords - Domaini

SignalSequence analysis

Family and domain databases

InterProiView protein in InterPro
IPR013111 EGF_extracell
IPR027070 Integrin_b-like_p1
IPR015812 Integrin_bsu
PANTHERiPTHR10082 PTHR10082, 2 hits
PTHR10082:SF3 PTHR10082:SF3, 2 hits
PfamiView protein in Pfam
PF07974 EGF_2, 3 hits
PROSITEiView protein in PROSITE
PS00243 INTEGRIN_BETA, 6 hits

Sequencei

Sequence statusi: Complete.

A0A1S3FRE8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRPRGVRNLL LLASSLLFVG LSAVPQGFSP SLRSWSGAPC RLSRAESERR
60 70 80 90 100
CRAPGQPPGG ALCHGRGHCE CGVCICHVTQ PGTYFGPLCE CHEWVCQTYD
110 120 130 140 150
GNTCAGTCHC GRCKCDDSDG NGLVYGKFCE CDDRECIDDE TEEICGGHGK
160 170 180 190 200
CYCGNCYCEA GWHGDKCEFQ CDITPWESKR RCTSPDGQIC SNRGTCVCGE
210 220 230 240 250
CSCHDVDPTG DWGDIHGDTC ECDERDCRPV YDRYSDDFCS GHGQCNCGRC
260 270 280 290 300
DCKAGWYGKK CEHPRSCPLS AEESSRKCQG TSELPCSGRG KCECGKCTCY
310 320 330 340 350
PPGDSRVYGK TCECDDRRCE DLEGVVCAGH GTCSCGRCVC ERGWFGAHCQ
360 370 380 390 400
HPRKCNMTEE QSRSLCESAD GILCSGKGSC HCGKCICSAE EWYISGEFCD
410 420 430 440
CDDRDCDKHD GLICTGNGIC SCGNCECWDG WNGNACEIWL GTEYP
Length:445
Mass (Da):48,537
Last modified:April 12, 2017 - v1
Checksum:i494BEFBC3E4FDBDD
GO

Sequence databases

RefSeqiXP_012878442.1, XM_013022988.1

Genome annotation databases

GeneIDi105990549

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_012878442.1, XM_013022988.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi105990549

Organism-specific databases

CTDi9358

Family and domain databases

InterProiView protein in InterPro
IPR013111 EGF_extracell
IPR027070 Integrin_b-like_p1
IPR015812 Integrin_bsu
PANTHERiPTHR10082 PTHR10082, 2 hits
PTHR10082:SF3 PTHR10082:SF3, 2 hits
PfamiView protein in Pfam
PF07974 EGF_2, 3 hits
PROSITEiView protein in PROSITE
PS00243 INTEGRIN_BETA, 6 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1S3FRE8_DIPOR
AccessioniPrimary (citable) accession number: A0A1S3FRE8
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: October 25, 2017
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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