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Protein
Submitted name:

leucine-rich repeat-containing protein 16B

Gene

LRRC16B

Organism
Erinaceus europaeus (Western European hedgehog)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
leucine-rich repeat-containing protein 16BImported
Gene namesi
Name:LRRC16BImported
OrganismiErinaceus europaeus (Western European hedgehog)Imported
Taxonomic identifieri9365 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaInsectivoraErinaceidaeErinaceinaeErinaceus
Proteomesi
  • UP000079721 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini778 – 1064CARMIL_CInterPro annotationAdd BLAST287

Family and domain databases

Gene3Di2.30.29.30, 1 hit
3.80.10.10, 1 hit
InterProiView protein in InterPro
IPR029766 CARMIL3
IPR031943 CARMIL_C
IPR001611 Leu-rich_rpt
IPR032675 LRR_dom_sf
IPR011993 PH-like_dom_sf
PANTHERiPTHR24112:SF43 PTHR24112:SF43, 1 hit
PfamiView protein in Pfam
PF16000 CARMIL_C, 1 hit
PF13516 LRR_6, 2 hits

Sequencei

Sequence statusi: Complete.

A0A1S3AKQ8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAKSGAELTR ELQDSIRRCL SHGPVLQQHR VKLETKPKKF EDRVLALTSW
60 70 80 90 100
RLHLFPIKVP AKVESSFNVL EIRSFNTLSQ NQILVETERG MVSLRLPSAE
110 120 130 140 150
SVDQVTRHVS SALSKVCPGP GCFIRRGNAD TPEGPRDTSP NSETSTSTTH
160 170 180 190 200
SVCGGFSETY AALCDYNGLH CREEVQWDVD TIYHAEDNRE FNLLDFSHLD
210 220 230 240 250
SRDLALMVAA LAYNQWFTKL YCKDLRLSSE VLEQVLHTLS KSGSLEELVL
260 270 280 290 300
DNAGLKTDFV QKLAGVFGEN GSCVLHALTL SHNPIEDKGF FSLSQQLLCF
310 320 330 340 350
PTGLTKLCLA KTAISPRGLQ ALGQTFGANP AFASSLRYLD LSKNPGLLAT
360 370 380 390 400
DEANALYSFL AQPNALVHLD LAGTDCTIDA LLGALLHGCC SHLTYLNLAR
410 420 430 440 450
NTCSHRKGRE APPAFKQFFS SAYTLSHANL SATRLPLEAL RALLQGLSLN
460 470 480 490 500
SHLSELHLDL SSCELRSAGA QALQEQLGAV TCIGSLDLSD NGFDSDLLTL
510 520 530 540 550
VPALGKNKSL KHLFLGKNFN VKAKTLEEIL HKLVQLIQEE DCSLQSLSVA
560 570 580 590 600
DSRLKLRTSI LINALGSNTC LAKVDLSGNG MEDIGAKMLS KALQINSSLR
610 620 630 640 650
TILWDRNNTS ALGFLDIARA LESNHTLRFM SFPVSDISQA YRSAPERTED
660 670 680 690 700
VWQKIQWCLV RNNHSQTCPQ EQAFRLQQGL VTSSAEQMLQ RLCGRVQEEV
710 720 730 740 750
RALRLCPLEP VQDELLYARD LIKDAKNSRA LFPSLYELGH VLANDGPVRQ
760 770 780 790 800
RLESVASEVS KAVDKELQVI LESMVSLTQE LCPVAMRVAE GHNKMLSNVA
810 820 830 840 850
ERVTVPRNFI RGALLEQAGQ DIQNKLDEVK LSVVTYLTNS IVDEILQELY
860 870 880 890 900
HSHKSLARHL AQLRTLSDPS SGPGQSQDLS SRGRGRSHDH EETTDDELGT
910 920 930 940 950
NIDTMAIKKQ KRCRKIRPVS AFISGSPQDM ESQLGSLGIP PGWFSGLGSS
960 970 980 990 1000
QPTAGGSWEG LSELPTHGYK LRHQTQGRPR PPRTTPPGPG RPSVSPSTRQ
1010 1020 1030 1040 1050
ENGMATRLDE GLEDFFSRRV MDESSSYPRT LRTLRPGLSE PPLPPLQKKR
1060 1070 1080 1090 1100
RRGLFHFRRP RSFKGDRGPG SPTTGLLLPP PPPPPPTQES PPSPDLPSLG
1110 1120 1130 1140 1150
NNSSPCWTPE EESSLLPGFG GGRGPSFRRK MGTEGAEPRD GGPAPGMTQQ
1160 1170 1180 1190 1200
PRVHGVALPE LGRAKGWSFD GKREGSGPDP EGSAQAWQKR RSSDDAGPGA
1210 1220 1230 1240 1250
WKPPPPPQST KPSFSAMRRA EATWHIAEES APYHSCQSPS PASQDDEEEK
1260 1270 1280 1290 1300
AETLFPERTV PARNAKVKDP PLAPRPPKPV VGPRGHRLPQ ELGGREEAEA
1310 1320 1330 1340 1350
VAAAPGMCRP RLRLGSQQDQ EEPEVPGPPD PSRRTAPLKP KRTRRAQSCD
1360 1370
KLEPDRRRPP DPAGTSEPGT D
Length:1,371
Mass (Da):150,322
Last modified:April 12, 2017 - v1
Checksum:iA88A5AF0AC73657F
GO

Sequence databases

RefSeqiXP_007536483.1, XM_007536421.1

Genome annotation databases

GeneIDi103125609

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_007536483.1, XM_007536421.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi103125609

Organism-specific databases

CTDi90668

Family and domain databases

Gene3Di2.30.29.30, 1 hit
3.80.10.10, 1 hit
InterProiView protein in InterPro
IPR029766 CARMIL3
IPR031943 CARMIL_C
IPR001611 Leu-rich_rpt
IPR032675 LRR_dom_sf
IPR011993 PH-like_dom_sf
PANTHERiPTHR24112:SF43 PTHR24112:SF43, 1 hit
PfamiView protein in Pfam
PF16000 CARMIL_C, 1 hit
PF13516 LRR_6, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1S3AKQ8_ERIEU
AccessioniPrimary (citable) accession number: A0A1S3AKQ8
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: February 28, 2018
This is version 7 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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