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Protein
Submitted name:

gephyrin isoform X3

Gene

GPHN

Organism
Erinaceus europaeus (Western European hedgehog)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
gephyrin isoform X3Imported
Gene namesi
Name:GPHNImported
OrganismiErinaceus europaeus (Western European hedgehog)Imported
Taxonomic identifieri9365 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaInsectivoraErinaceidaeErinaceinaeErinaceus
Proteomesi
  • UP000079721 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini18 – 178MoCF_biosynthInterPro annotationAdd BLAST161
Domaini548 – 691MoCF_biosynthInterPro annotationAdd BLAST144

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili179 – 199Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

CDDicd00887 MoeA, 1 hit
cd00886 MogA_MoaB, 1 hit
Gene3Di2.40.340.10, 1 hit
3.40.980.10, 2 hits
InterProiView protein in InterPro
IPR036425 MoaB/Mog-like_dom_sf
IPR001453 MoaB/Mog_dom
IPR008284 MoCF_biosynth_CS
IPR038987 MoeA-like
IPR005111 MoeA_C_domain_IV
IPR036688 MoeA_C_domain_IV_sf
IPR005110 MoeA_linker/N
IPR036135 MoeA_linker/N_sf
PANTHERiPTHR10192 PTHR10192, 1 hit
PfamiView protein in Pfam
PF00994 MoCF_biosynth, 2 hits
PF03454 MoeA_C, 1 hit
PF03453 MoeA_N, 1 hit
SMARTiView protein in SMART
SM00852 MoCF_biosynth, 2 hits
SUPFAMiSSF53218 SSF53218, 2 hits
SSF63867 SSF63867, 1 hit
SSF63882 SSF63882, 1 hit
TIGRFAMsiTIGR00177 molyb_syn, 2 hits
PROSITEiView protein in PROSITE
PS01078 MOCF_BIOSYNTHESIS_1, 1 hit
PS01079 MOCF_BIOSYNTHESIS_2, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 7 potential isoforms that are computationally mapped.Show allAlign All

A0A1S2ZX12-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MATEGMILTN HDHQIRVGVL TVSDSCFRNL AEDRSGINLK DLVQDPSLLG
60 70 80 90 100
GTISAYKIVP DEIEEIKETL IDWCDEKELN LILTTGGTGF APRDVTPEKF
110 120 130 140 150
PTFPFCGLQK GATKEVIERE APGMALAMLM GSLNVTPLGM LSRPVCGIRG
160 170 180 190 200
KTLIINLPGS KKGSQECFQF ILPALPHAID LLRDAIVKVK EVHDELEDLP
210 220 230 240 250
SPPPPLSPPP TTSPHKQTED KGVQCEEEEE EKKDSGVAST EDSSSSHITA
260 270 280 290 300
AAIAAKIPDS IISRGVQVLP RDTASLSTTP SESPRAQATS RLSTASCPTP
310 320 330 340 350
KQIRRPDESK GVSSRVGSLK ARLPSCSSTY SVSEVQSRCS SKENILRASH
360 370 380 390 400
SAVDITKVAR RHRMSPFPLT SMDKAFITVL EMTPVLGTEI INYRDGMGRV
410 420 430 440 450
LAQDVYAKDN LPPFPASVKD GYAVRAADGP GDRFIIGESQ AGEQPTQTVM
460 470 480 490 500
PGQVMRVTTG APIPCGADAV VQVEDTELIR ESDDGTEELE VRILVQARPG
510 520 530 540 550
QDIRPIGHDI KRGECVLAKG THMGPSEIGL LATVGVTEVE VNKFPVVAVM
560 570 580 590 600
STGNELLNPE DDLLPGKIRD SNRSTLLATI QEHGYPTINL GIVGDNPDDL
610 620 630 640 650
LNALNEGISR ADVIITSGGV SMGEKDYLKQ VLDIDLHAQI HFGRVFMKPG
660 670 680 690 700
LPTTFATLDI DGVRKIIFAL PGNPVSAVVT CNLFVVPALR KMQGILDPRP
710 720 730 740 750
TIIKARLSCD VKLDPRPEYH RCILTWHHQE PLPWAQSTGN QMSSRLMSMR
760 770 780
SANGLLMLPP KTEQYVELHK GEVVDVMVIG RL
Length:782
Mass (Da):84,750
Last modified:April 12, 2017 - v1
Checksum:iC5490416FAF35DE1
GO

Computationally mapped potential isoform sequencesi

There are 7 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1S2ZWZ2A0A1S2ZWZ2_ERIEU
gephyrin isoform X7
GPHN
736Annotation score:
A0A1S3WF81A0A1S3WF81_ERIEU
gephyrin isoform X2
GPHN
791Annotation score:
A0A1S3WEX5A0A1S3WEX5_ERIEU
gephyrin isoform X6
GPHN
768Annotation score:
A0A1S2ZX03A0A1S2ZX03_ERIEU
gephyrin isoform X4
GPHN
772Annotation score:
A0A1S2ZWY5A0A1S2ZWY5_ERIEU
gephyrin isoform X8
GPHN
705Annotation score:
A0A1S2ZWZ4A0A1S2ZWZ4_ERIEU
gephyrin isoform X5
GPHN
769Annotation score:
A0A1S3WEX4A0A1S3WEX4_ERIEU
gephyrin isoform X1
GPHN
804Annotation score:

Sequence databases

RefSeqiXP_007525881.1, XM_007525819.1

Genome annotation databases

GeneIDi103115961

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_007525881.1, XM_007525819.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi103115961

Organism-specific databases

CTDi10243

Family and domain databases

CDDicd00887 MoeA, 1 hit
cd00886 MogA_MoaB, 1 hit
Gene3Di2.40.340.10, 1 hit
3.40.980.10, 2 hits
InterProiView protein in InterPro
IPR036425 MoaB/Mog-like_dom_sf
IPR001453 MoaB/Mog_dom
IPR008284 MoCF_biosynth_CS
IPR038987 MoeA-like
IPR005111 MoeA_C_domain_IV
IPR036688 MoeA_C_domain_IV_sf
IPR005110 MoeA_linker/N
IPR036135 MoeA_linker/N_sf
PANTHERiPTHR10192 PTHR10192, 1 hit
PfamiView protein in Pfam
PF00994 MoCF_biosynth, 2 hits
PF03454 MoeA_C, 1 hit
PF03453 MoeA_N, 1 hit
SMARTiView protein in SMART
SM00852 MoCF_biosynth, 2 hits
SUPFAMiSSF53218 SSF53218, 2 hits
SSF63867 SSF63867, 1 hit
SSF63882 SSF63882, 1 hit
TIGRFAMsiTIGR00177 molyb_syn, 2 hits
PROSITEiView protein in PROSITE
PS01078 MOCF_BIOSYNTHESIS_1, 1 hit
PS01079 MOCF_BIOSYNTHESIS_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1S2ZX12_ERIEU
AccessioniPrimary (citable) accession number: A0A1S2ZX12
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: July 18, 2018
This is version 8 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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