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Protein
Submitted name:

cytoplasmic polyadenylation element-binding protein 4 isoform X3

Gene

CPEB4

Organism
Erinaceus europaeus (Western European hedgehog)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
cytoplasmic polyadenylation element-binding protein 4 isoform X3Imported
Gene namesi
Name:CPEB4Imported
OrganismiErinaceus europaeus (Western European hedgehog)Imported
Taxonomic identifieri9365 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaInsectivoraErinaceidaeErinaceinaeErinaceus
Proteomesi
  • UP000079721 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini455 – 542RRMInterPro annotationAdd BLAST88
Domaini563 – 641RRMInterPro annotationAdd BLAST79

Family and domain databases

Gene3Di3.30.40.130, 1 hit
3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR032296 CEBP_ZZ
IPR038446 CEBP_ZZ_sf
IPR034819 CPEB
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PANTHERiPTHR12566 PTHR12566, 1 hit
PfamiView protein in Pfam
PF16366 CEBP_ZZ, 1 hit
PF16367 RRM_7, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

A0A1S2ZKS3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGDYGFGVLV QSNTGNKSTF PVRFHPHLQP PHHHQNATPS PAAFINNSTA
60 70 80 90 100
ANGSSAGSAW LFPAPATHNL QDEILGSEKA KSQQQEQQDR LEKQQLSPSP
110 120 130 140 150
GQEAGTLPEP EKAKSEESQD NSSENGGSGK EKIRIESPVL TGFDYQEATG
160 170 180 190 200
LGTSTQPLTS SASSLTGFSN WSAAIAPSSS TIINEDASFF HQGGVPAASA
210 220 230 240 250
NNGALLFQNF PHHVSPSFGG SFSPQIGPLS QHHPHHPHFQ HHHSQHQQQR
260 270 280 290 300
RSPASPHPPP FTHRNAAFSQ LPHLANNLNK PPSPWSSYQS PSPTPSSSWS
310 320 330 340 350
PGGAGYGGWG GSQGRDHRRG LNGGITPLNS ISPLKKNFAS NHIQLQKYAR
360 370 380 390 400
PSSAFAPKSW MEDSLNRADN IFPFPDRPRT FDMHSLESSL IDIMRAENDS
410 420 430 440 450
IKARTYGRRR GQSSLFPMED GFLDDGRGDQ PLHSGLGSPH CFTHQNGERV
460 470 480 490 500
ERYSRKVFVG GLPPDIDEDE ITASFRRFGP LIVDWPHKAE SKSYFPPKGY
510 520 530 540 550
AFLLFQDESS VQALIDACIE EDGKLYLCVS SPTIKDKPVQ IRPWNLSDSD
560 570 580 590 600
FVMDGSQPLD PRKTIFVGGV PRPLRAVELA MIMDRLYGGV CYAGIDTDPE
610 620 630 640 650
LKYPKGAGRV AFSNQQSYIA AISARFVQLQ HGEIDKRVEV KPYVLDDQLC
660 670 680 690 700
DECQGARCGG KFAPFFCANV TCLQYYCEYC WAAIHSRAGR EFHKPLVKEG
710
GDRPRHISFR WN
Length:712
Mass (Da):78,323
Last modified:April 12, 2017 - v1
Checksum:i7534F7108B92E25C
GO

Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1S3W846A0A1S3W846_ERIEU
cytoplasmic polyadenylation element...
CPEB4
721Annotation score:
A0A1S2ZKS8A0A1S2ZKS8_ERIEU
cytoplasmic polyadenylation element...
CPEB4
729Annotation score:
A0A1S2ZKT1A0A1S2ZKT1_ERIEU
cytoplasmic polyadenylation element...
CPEB4
704Annotation score:

Sequence databases

RefSeqiXP_007520886.1, XM_007520824.1

Genome annotation databases

GeneIDi103111539

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_007520886.1, XM_007520824.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi103111539

Organism-specific databases

CTDi80315

Family and domain databases

Gene3Di3.30.40.130, 1 hit
3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR032296 CEBP_ZZ
IPR038446 CEBP_ZZ_sf
IPR034819 CPEB
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PANTHERiPTHR12566 PTHR12566, 1 hit
PfamiView protein in Pfam
PF16366 CEBP_ZZ, 1 hit
PF16367 RRM_7, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1S2ZKS3_ERIEU
AccessioniPrimary (citable) accession number: A0A1S2ZKS3
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: March 28, 2018
This is version 9 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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