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Protein
Submitted name:

nucleoporin SEH1

Gene

SEH1L

Organism
Erinaceus europaeus (Western European hedgehog)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processProtein transportSAAS annotation, Transport

Names & Taxonomyi

Protein namesi
Submitted name:
nucleoporin SEH1Imported
Gene namesi
Name:SEH1LImported
OrganismiErinaceus europaeus (Western European hedgehog)Imported
Taxonomic identifieri9365 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaInsectivoraErinaceidaeErinaceinaeErinaceus
Proteomesi
  • UP000079721 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini251 – 292WD_REPEATS_REGIONInterPro annotationAdd BLAST42
Repeati251 – 283WDPROSITE-ProRule annotationAdd BLAST33

Sequence similaritiesi

Belongs to the WD repeat SEC13 family.SAAS annotation

Keywords - Domaini

RepeatSAAS annotation, WD repeatPROSITE-ProRule annotationSAAS annotation

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR037597 Nucleoporin_Seh1
IPR037363 Sec13/Seh1_fam
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PANTHERiPTHR11024 PTHR11024, 2 hits
PTHR11024:SF3 PTHR11024:SF3, 2 hits
PfamiView protein in Pfam
PF00400 WD40, 1 hit
SMARTiView protein in SMART
SM00320 WD40, 2 hits
SUPFAMiSSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS50082 WD_REPEATS_2, 1 hit
PS50294 WD_REPEATS_REGION, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1S2ZCH3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MHVYTQNRTQ MFIAALFIIA KIWQVSFNRL KNGFLILHLY TGVVSDCVGS
60 70 80 90 100
SRQRALSNDS LKRSLRNPEE VQLASTGRRA VPRRLRHDRD FAGHDGVWDK
110 120 130 140 150
SESGDWHCTA SWKVKRTTLV DSRTSVTDVK FAPKHMGLML ATCSADGIVR
160 170 180 190 200
IYEAPDVMNL SQWSLQHEIS CKLSCSCISW NPSRKYAKAE TLMTVTDPVH
210 220 230 240 250
DIAFAPNLGR SFHILAIATK DVRIFTLKPV RKELTSSGGP TKFEIHIVAQ
260 270 280 290 300
FDNHNSQVWR VSWNITGTVL ASSGDDGCVR LWKANYMDNW KCTGILKGNG
310 320 330 340 350
SPVSGSSQQG NSNPSLGSNT PNLQHSLNGS SAGRYFFPPL DSPRAGSRWS
360 370 380 390
SYAQLLPPPP LVEYSCDADT ANLQYPHPRR RSLSRPLNPL PENEGV
Length:396
Mass (Da):44,109
Last modified:April 12, 2017 - v1
Checksum:i14969BFD25B91F53
GO

Sequence databases

RefSeqiXP_007517254.1, XM_007517192.1

Genome annotation databases

GeneIDi103108289

Similar proteinsi

Entry informationi

Entry nameiA0A1S2ZCH3_ERIEU
AccessioniPrimary (citable) accession number: A0A1S2ZCH3
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: April 25, 2018
This is version 10 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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