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Protein

DNA ligase

Gene

LOC101512446

Organism
Cicer arietinum (Chickpea) (Garbanzo)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n)-3'-hydroxyl + 5'-phospho-(deoxyribonucleotide)(m) = (deoxyribonucleotide)(n+m) + AMP + diphosphate.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseUniRule annotationImported
Biological processDNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation
LigandATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
Name:LOC101512446Imported
OrganismiCicer arietinum (Chickpea) (Garbanzo)Imported
Taxonomic identifieri3827 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaeCicereaeCicer
Proteomesi
  • UP000087171 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini329 – 478DNA_LIGASE_A3InterPro annotationAdd BLAST150
Domaini651 – 739BRCTInterPro annotationAdd BLAST89
Domaini799 – 910BRCTInterPro annotationAdd BLAST112

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili126 – 146Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

KOiK10777

Family and domain databases

CDDicd00027 BRCT, 2 hits
Gene3Di1.10.3260.10, 1 hit
3.40.50.10190, 2 hits
InterProiView protein in InterPro
IPR001357 BRCT_dom
IPR036420 BRCT_dom_sf
IPR000977 DNA_ligase_ATP-dep
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR012308 DNA_ligase_ATP-dep_N
IPR036599 DNA_ligase_N_sf
IPR029710 LIG4
IPR012340 NA-bd_OB-fold
PANTHERiPTHR10459:SF7 PTHR10459:SF7, 2 hits
PfamiView protein in Pfam
PF16589 BRCT_2, 1 hit
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF04675 DNA_ligase_A_N, 1 hit
SMARTiView protein in SMART
SM00292 BRCT, 2 hits
SUPFAMiSSF117018 SSF117018, 1 hit
SSF50249 SSF50249, 1 hit
SSF52113 SSF52113, 3 hits
TIGRFAMsiTIGR00574 dnl1, 1 hit
PROSITEiView protein in PROSITE
PS50172 BRCT, 2 hits
PS00697 DNA_LIGASE_A1, 1 hit
PS00333 DNA_LIGASE_A2, 1 hit
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1S2XGH1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTEQTKFSVL CSLLTWTQRT KSPAKKRAKF RKFLDSFCTD RNYFPAIRLI
60 70 80 90 100
LPNLDRERGS YGLKESVLAT SLIDALGLSK DSHDALRLVN WRKGGSKTGV
110 120 130 140 150
NAGNFALVAS EVLQLRQGTA SGGLTIKELN DLLDQLSSSE NRAEKTLVLS
160 170 180 190 200
TLIQKTNAQE MKWIIMIILK DLKLGISEKS IFHEFHPDAE DLFNVTCDLK
210 220 230 240 250
LVCEKLRDRN QRHKRQDIEV GKAVRPQLAK RVANAAEAWK KLHGKEVVAE
260 270 280 290 300
CKFDGDRIQI HKNGTEIHFF SRNFLDHSEY AHAMSEIIVQ NILVDRCILD
310 320 330 340 350
GEMLVWDTSL NRFAEFGSNQ EIAKAARDGL DSNRQLCYVA FDILYFGDTS
360 370 380 390 400
VIHQTLKERH EILRKVVRPM KGRLEILLPN GGINSHRSSG EPCWSFIAHN
410 420 430 440 450
ADEVERFFKE TIENRDEGIV VKDLSSKWEP SDRSGKWLKL KPEYIQAGSD
460 470 480 490 500
LDVLIIGGYY GSGRRGGEVA QFLVGLAERP SPNTHPKRFI SFCRVGTGLS
510 520 530 540 550
DDELEAVVTK LKPYFRKYEY PKKGPPNFYQ VTNHSKERPD VWVDSPEKSI
560 570 580 590 600
ILSITSDIRT IESEVFAAPY CLRFPRIDRV RYDKPWYECL DVQSFIELVQ
610 620 630 640 650
SSNGTTQRDT EYGSKKDSKP KRMKPSIRGE KKNVSIVPSH LIQTDVSSVT
660 670 680 690 700
GGSLMFSNMM FYFVNVPPSH SLESFHKIVA ENGGTFSMNL NNSVTHCVAA
710 720 730 740 750
DSKGFKFDAA KRRGDIIHYT WVLDCYKQKK LVRLQPKYFL FLSELTKKKL
760 770 780 790 800
QEEIDEFSDS YFLDLDLGDI KQLLSNINRS GSEDVSTVDH YRKKYCPKDK
810 820 830 840 850
WSVFNGCSIY FDTTMPSLKE DWQFLLVLSL KRFKLEVLMG GGKVTSNLNF
860 870 880 890 900
ATHVVALFLP SCHNHEEIES SFTLVERKLL RSKRLHVVNS KWLEDCLKSS
910 920 930 940 950
QRLSEDTYSL KPYGIEESTA EDCEHELAVD ADLIKDNVED QNISFSNKES
960 970 980 990 1000
KQSRAKAASG DSLALASQEK RGLRKRGRPA GRGIKKVKTD GNQARKARSQ
1010 1020 1030 1040 1050
IAKKRAKLCE YESDESDSLD KKPYEQEADI AEGSLDFYNE HSEPHETEKT
1060 1070 1080 1090 1100
HDVQGTKAVE CSEQNKGIEL VDFRDKQHEN MSVPEIEMND VHNDENSHVT
1110 1120 1130 1140 1150
EKLEILTDPV QAMLLDMIPS LATEKVEQPL NSYVEEEKPP EISNEEPSTS
1160
KKKKVSFKAI AGDLLKDW
Length:1,168
Mass (Da):132,966
Last modified:April 12, 2017 - v1
Checksum:i0F5B0290635E7AAB
GO

Sequence databases

RefSeqiXP_004487997.1, XM_004487940.1

Genome annotation databases

GeneIDi101512446
KEGGicam:101512446

Similar proteinsi

Entry informationi

Entry nameiA0A1S2XGH1_CICAR
AccessioniPrimary (citable) accession number: A0A1S2XGH1
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: December 20, 2017
This is version 7 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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