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Protein
Submitted name:

Uncharacterized protein

Gene

CCACVL1_06070

Organism
Corchorus capsularis (Jute)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CCACVL1_06070Imported
OrganismiCorchorus capsularis (Jute)Imported
Taxonomic identifieri210143 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsMalvalesMalvaceaeGrewioideaeApeibeaeCorchorus
Proteomesi
  • UP000188268 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini189 – 357Helicase ATP-bindingInterPro annotationAdd BLAST169
Domaini518 – 691Helicase C-terminalInterPro annotationAdd BLAST174

Phylogenomic databases

OMAiYMRKQAN

Family and domain databases

CDDicd00079 HELICc, 1 hit
InterProiView protein in InterPro
IPR039686 FANCM/Mph1-like
IPR006935 Helicase/UvrB_N
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
PANTHERiPTHR14025:SF20 PTHR14025:SF20, 2 hits
PfamiView protein in Pfam
PF00271 Helicase_C, 1 hit
PF04851 ResIII, 1 hit
SMARTiView protein in SMART
SM00487 DEXDc, 1 hit
SM00490 HELICc, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS51192 HELICASE_ATP_BIND_1, 1 hit
PS51194 HELICASE_CTER, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1R3JHM2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MIAPLDMSKP KYSACPFGPA DFLNPKSPSK FYRQGNTFCL PISQGFCAKD
60 70 80 90 100
SMADSMASNP PLQVIGEDDE DDEDEFDWEA AVREIDKACQ TSKPSSNNSS
110 120 130 140 150
SQFPPPPSAQ IPKRNAAMAT AAGTSKQSTL DKFIARVGPR PASDKHQTVE
160 170 180 190 200
PEVDIEGDYR VASVDIDMEA AKTWIYPVNV PLRDYQLAIT RTALFSNTLV
210 220 230 240 250
ALPTGLGKTL IAAVVIYNYF RWFPEGKIVF AAPSRPLVMQ QIEACHNVVG
260 270 280 290 300
IPQEWTIDMT GQISPTRRAS FWKTKRVFFV TPQVLEKDIQ SGTCLAKYLV
310 320 330 340 350
CLVIDEAHRA LGNYSYCVAV RELMAMPVQL RILALTATPG SKQLAIQQII
360 370 380 390 400
DNLYISKLEY RNESDHDVSP YVHNRKIEVI EVPLGQDAAE VNNRLLEVIR
410 420 430 440 450
PYVARLHAIG LIQNRDYQTL SPVDLLNSRD KFRQAPPPDL PHVKHGEVEA
460 470 480 490 500
CFAVLITLYH IRKLLSSHGI RPAYEMLEEK LRQGHFSRLM SKNEDIMKAK
510 520 530 540 550
LLMQRSLSHG APSPKLSKML QVLVKHFETK DPKNSRVIIF SNFRGSVRDI
560 570 580 590 600
MNALASVGDL VKATEFIGQS SGKALKGQSQ KVQQAVLEKF RAGGYNVIVA
610 620 630 640 650
TSIGEEGLDI MEVDLVICFD ANVSPLRMIQ RMGRTGRKHD GRIPHICKPE
660 670 680 690 700
VHYVELSIER FVPRGKKLKV DQAIETPPFR EKLTVAETEL IAKYFHPTSE
710 720 730 740 750
STWRPSLIAF PDFQASPSKV CKVKHSCRTE MLIESMQYLQ GLTFPGGNGD
760 770 780 790 800
YFVEDEVSSG DCFGVGIVDQ HDSDSLALDN SPAANTQLGG LYPAESSMRI
810 820 830 840 850
SRTKEKLNGP DCGQKCPQSH SYLFGSDFVS VDALGNILII SVPSLHFEDL
860 870 880 890 900
MHSKHESPHT KEMKNSLKED ANHVKISAGT MLTEAVPNVT ASQTQSIKDD
910 920 930 940 950
TLSIPGFCEI NFKNEKMLDG AEKIPEIPGG TCETPDIEEI KAPPPLADER
960 970 980 990 1000
YTDLQDTELS PRLTNLIKIG VVPESPITEI RILKDKIRNE PLIPDLASPA
1010 1020 1030 1040 1050
KLCTGLLLRS SSPVENEGAV MDNSPCGRKV LVVKDKMTPL VKMNPVFRCS
1060 1070 1080 1090 1100
PASPLETKTP LAHLTNSIGS KSWHLSSGEK VEPVNHARKF KRLRKVGDCG
1110 1120 1130 1140 1150
KVRSSKGMKE NSIISIEDVA KSYSGTSPIR TKHGRGKRKQ ENDARTFIDE
1160 1170 1180 1190 1200
EAEVSTDAEI SADEDDDNES YDDSFIDDRI NPTADSSQTE SGRVDMMAIY
1210 1220 1230 1240 1250
RRSLLSQSPM VGRPTSSEFS PNCVASTSKE NGSGCAFGKT LYSPQVLESI
1260 1270 1280 1290 1300
YQPTKKNTES FQMEKRVSSE SIPCRTNDFP KENGCMHSRK RKLSFLQLES
1310 1320 1330 1340 1350
IPAINLDREF LFQSEVQGKE SSKGSQQPQV GKITVNKNEF DDDDDDDDQF
1360 1370 1380 1390 1400
YASLDLDAVE AQATLLLRHR SESSIEKQEN IAPSNLQHGG LQGSPSFDLG

IW
Length:1,402
Mass (Da):155,591
Last modified:April 12, 2017 - v1
Checksum:iE5F15DC81072F4E2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AWWV01007906 Genomic DNA Translation: OMO94280.1

Genome annotation databases

EnsemblPlantsiOMO94280; OMO94280; CCACVL1_06070
GrameneiOMO94280; OMO94280; CCACVL1_06070

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AWWV01007906 Genomic DNA Translation: OMO94280.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOMO94280; OMO94280; CCACVL1_06070
GrameneiOMO94280; OMO94280; CCACVL1_06070

Phylogenomic databases

OMAiYMRKQAN

Family and domain databases

CDDicd00079 HELICc, 1 hit
InterProiView protein in InterPro
IPR039686 FANCM/Mph1-like
IPR006935 Helicase/UvrB_N
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
PANTHERiPTHR14025:SF20 PTHR14025:SF20, 2 hits
PfamiView protein in Pfam
PF00271 Helicase_C, 1 hit
PF04851 ResIII, 1 hit
SMARTiView protein in SMART
SM00487 DEXDc, 1 hit
SM00490 HELICc, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS51192 HELICASE_ATP_BIND_1, 1 hit
PS51194 HELICASE_CTER, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiA0A1R3JHM2_COCAP
AccessioniPrimary (citable) accession number: A0A1R3JHM2
Entry historyiIntegrated into UniProtKB/TrEMBL: April 12, 2017
Last sequence update: April 12, 2017
Last modified: November 7, 2018
This is version 8 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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